Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP13P45452 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP13P45452 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.64■□□□□ 0.57
MMP13P45452 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.64■□□□□ 0.57
MMP13P45452 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
MMP13P45452 KRT18P38-201ENST00000449496 1282 ntBASIC18.64■□□□□ 0.57
MMP13P45452 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.64■□□□□ 0.57
MMP13P45452 AC022616.7-201ENST00000525383 220 ntBASIC18.64■□□□□ 0.57
MMP13P45452 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP13P45452 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP13P45452 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP13P45452 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP13P45452 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP13P45452 AC006116.8-202ENST00000587620 1550 ntBASIC18.64■□□□□ 0.57
MMP13P45452 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.64■□□□□ 0.57
MMP13P45452 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.63■□□□□ 0.57
MMP13P45452 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP13P45452 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP13P45452 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP13P45452 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP13P45452 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.63■□□□□ 0.57
MMP13P45452 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.63■□□□□ 0.57
MMP13P45452 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.63■□□□□ 0.57
MMP13P45452 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MMP13P45452 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP13P45452 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP13P45452 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.63■□□□□ 0.57
MMP13P45452 LINC01238-205ENST00000567549 1107 ntBASIC18.63■□□□□ 0.57
MMP13P45452 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.63■□□□□ 0.57
MMP13P45452 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.63■□□□□ 0.57
MMP13P45452 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MMP13P45452 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP13P45452 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.63■□□□□ 0.57
MMP13P45452 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP13P45452 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP13P45452 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MMP13P45452 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.63■□□□□ 0.57
MMP13P45452 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MMP13P45452 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.63■□□□□ 0.57
MMP13P45452 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP13P45452 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
MMP13P45452 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
MMP13P45452 BCL2-203ENST00000589955 5011 ntBASIC18.63■□□□□ 0.57
MMP13P45452 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP13P45452 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MMP13P45452 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP13P45452 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP13P45452 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.62■□□□□ 0.57
MMP13P45452 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.62■□□□□ 0.57
MMP13P45452 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP13P45452 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP13P45452 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP13P45452 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MMP13P45452 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MMP13P45452 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP13P45452 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP13P45452 FAM8A6P-201ENST00000407496 1135 ntBASIC18.62■□□□□ 0.57
MMP13P45452 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.62■□□□□ 0.57
MMP13P45452 AL136038.4-201ENST00000603606 1261 ntBASIC18.62■□□□□ 0.57
MMP13P45452 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP13P45452 AC079602.3-201ENST00000623931 403 ntBASIC18.62■□□□□ 0.57
MMP13P45452 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MMP13P45452 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
MMP13P45452 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.62■□□□□ 0.57
MMP13P45452 AL024508.2-201ENST00000607749 1894 ntBASIC18.62■□□□□ 0.57
MMP13P45452 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MMP13P45452 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
MMP13P45452 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.62■□□□□ 0.57
MMP13P45452 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP13P45452 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.62■□□□□ 0.57
MMP13P45452 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
MMP13P45452 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP13P45452 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP13P45452 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP13P45452 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP13P45452 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.61■□□□□ 0.57
MMP13P45452 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MMP13P45452 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.61■□□□□ 0.57
MMP13P45452 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.61■□□□□ 0.57
MMP13P45452 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 AC112907.2-201ENST00000448639 330 ntBASIC18.61■□□□□ 0.57
MMP13P45452 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.61■□□□□ 0.57
MMP13P45452 AL049597.2-201ENST00000565575 961 ntBASIC18.61■□□□□ 0.57
MMP13P45452 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.61■□□□□ 0.57
MMP13P45452 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms