Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 TSPY22P-201ENST00000427496 604 ntBASIC18.08■□□□□ 0.48
CHRNA4P43681 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.08■□□□□ 0.48
CHRNA4P43681 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
CHRNA4P43681 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.08■□□□□ 0.48
CHRNA4P43681 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA4P43681 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CHRNA4P43681 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA4P43681 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA4P43681 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA4P43681 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.08■□□□□ 0.48
CHRNA4P43681 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA4P43681 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA4P43681 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.08■□□□□ 0.48
CHRNA4P43681 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA4P43681 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CHRNA4P43681 AC009949.1-201ENST00000623048 1830 ntBASIC18.07■□□□□ 0.48
CHRNA4P43681 LINC00896-202ENST00000609602 2128 ntBASIC18.07■□□□□ 0.48
CHRNA4P43681 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA4P43681 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.07■□□□□ 0.48
CHRNA4P43681 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.07■□□□□ 0.48
CHRNA4P43681 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA4P43681 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA4P43681 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA4P43681 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.07■□□□□ 0.48
CHRNA4P43681 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.07■□□□□ 0.48
CHRNA4P43681 AC068472.1-201ENST00000474589 881 ntBASIC18.07■□□□□ 0.48
CHRNA4P43681 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA4P43681 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.07■□□□□ 0.48
CHRNA4P43681 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.07■□□□□ 0.48
CHRNA4P43681 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.07■□□□□ 0.48
CHRNA4P43681 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.07■□□□□ 0.48
CHRNA4P43681 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.07■□□□□ 0.48
CHRNA4P43681 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA4P43681 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA4P43681 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CHRNA4P43681 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.07■□□□□ 0.48
CHRNA4P43681 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA4P43681 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA4P43681 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA4P43681 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA4P43681 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.07■□□□□ 0.48
CHRNA4P43681 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.06■□□□□ 0.48
CHRNA4P43681 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA4P43681 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA4P43681 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA4P43681 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA4P43681 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.06■□□□□ 0.48
CHRNA4P43681 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.06■□□□□ 0.48
CHRNA4P43681 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA4P43681 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA4P43681 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.06■□□□□ 0.48
CHRNA4P43681 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.06■□□□□ 0.48
CHRNA4P43681 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CHRNA4P43681 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA4P43681 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.06■□□□□ 0.48
CHRNA4P43681 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA4P43681 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA4P43681 AC112698.1-201ENST00000510299 916 ntBASIC18.06■□□□□ 0.48
CHRNA4P43681 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA4P43681 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA4P43681 AL445228.2-201ENST00000605589 952 ntBASIC18.06■□□□□ 0.48
CHRNA4P43681 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.06■□□□□ 0.48
CHRNA4P43681 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.06■□□□□ 0.48
CHRNA4P43681 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA4P43681 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA4P43681 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CHRNA4P43681 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA4P43681 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CHRNA4P43681 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CHRNA4P43681 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CHRNA4P43681 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA4P43681 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CHRNA4P43681 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA4P43681 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.06■□□□□ 0.48
CHRNA4P43681 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA4P43681 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA4P43681 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA4P43681 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA4P43681 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.06■□□□□ 0.48
CHRNA4P43681 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA4P43681 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA4P43681 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA4P43681 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA4P43681 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CHRNA4P43681 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.05■□□□□ 0.48
CHRNA4P43681 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA4P43681 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA4P43681 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA4P43681 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA4P43681 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.05■□□□□ 0.48
CHRNA4P43681 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA4P43681 MTCL1P1-201ENST00000446207 792 ntBASIC18.05■□□□□ 0.48
CHRNA4P43681 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.05■□□□□ 0.48
CHRNA4P43681 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA4P43681 AC010331.1-201ENST00000611423 582 ntBASIC18.05■□□□□ 0.48
CHRNA4P43681 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA4P43681 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA4P43681 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CHRNA4P43681 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA4P43681 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms