Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTGFP29279 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTGFP29279 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTGFP29279 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.05■□□□□ 0.8
CTGFP29279 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.05■□□□□ 0.8
CTGFP29279 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTGFP29279 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTGFP29279 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CTGFP29279 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.05■□□□□ 0.8
CTGFP29279 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.05■□□□□ 0.8
CTGFP29279 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTGFP29279 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.05■□□□□ 0.8
CTGFP29279 SIGLEC30P-201ENST00000455569 941 ntBASIC20.05■□□□□ 0.8
CTGFP29279 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CTGFP29279 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CTGFP29279 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTGFP29279 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTGFP29279 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTGFP29279 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.05■□□□□ 0.8
CTGFP29279 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTGFP29279 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.04■□□□□ 0.8
CTGFP29279 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.04■□□□□ 0.8
CTGFP29279 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CTGFP29279 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTGFP29279 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTGFP29279 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTGFP29279 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTGFP29279 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.04■□□□□ 0.8
CTGFP29279 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.04■□□□□ 0.8
CTGFP29279 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.04■□□□□ 0.8
CTGFP29279 AC069262.1-201ENST00000539058 672 ntBASIC20.04■□□□□ 0.8
CTGFP29279 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.04■□□□□ 0.8
CTGFP29279 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.04■□□□□ 0.8
CTGFP29279 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CTGFP29279 LINC00628-201ENST00000628516 1289 ntBASIC20.04■□□□□ 0.8
CTGFP29279 AF228730.6-201ENST00000641497 218 ntBASIC20.04■□□□□ 0.8
CTGFP29279 AC084121.3-201ENST00000641716 218 ntBASIC20.04■□□□□ 0.8
CTGFP29279 AC105233.6-201ENST00000642093 218 ntBASIC20.04■□□□□ 0.8
CTGFP29279 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CTGFP29279 AC092919.2-201ENST00000623631 1645 ntBASIC20.04■□□□□ 0.8
CTGFP29279 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTGFP29279 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20.04■□□□□ 0.8
CTGFP29279 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTGFP29279 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CTGFP29279 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTGFP29279 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CTGFP29279 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.04■□□□□ 0.8
CTGFP29279 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.03■□□□□ 0.8
CTGFP29279 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTGFP29279 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTGFP29279 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTGFP29279 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.03■□□□□ 0.8
CTGFP29279 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTGFP29279 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTGFP29279 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTGFP29279 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTGFP29279 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTGFP29279 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.03■□□□□ 0.8
CTGFP29279 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTGFP29279 AC023141.5-201ENST00000458585 616 ntBASIC20.03■□□□□ 0.8
CTGFP29279 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTGFP29279 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.03■□□□□ 0.8
CTGFP29279 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
CTGFP29279 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTGFP29279 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.03■□□□□ 0.8
CTGFP29279 AC023141.13-201ENST00000604991 943 ntBASIC20.03■□□□□ 0.8
CTGFP29279 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTGFP29279 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CTGFP29279 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTGFP29279 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
CTGFP29279 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTGFP29279 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTGFP29279 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTGFP29279 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTGFP29279 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
CTGFP29279 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTGFP29279 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.03■□□□□ 0.8
CTGFP29279 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.03■□□□□ 0.8
CTGFP29279 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.02■□□□□ 0.8
CTGFP29279 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CTGFP29279 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CTGFP29279 AL121761.2-201ENST00000598007 1648 ntBASIC20.02■□□□□ 0.8
CTGFP29279 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTGFP29279 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTGFP29279 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTGFP29279 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTGFP29279 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTGFP29279 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.02■□□□□ 0.8
CTGFP29279 DUX4L27-201ENST00000554796 1261 ntBASIC20.02■□□□□ 0.8
CTGFP29279 AC025678.2-201ENST00000562061 970 ntBASIC20.02■□□□□ 0.8
CTGFP29279 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.02■□□□□ 0.8
CTGFP29279 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CTGFP29279 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CTGFP29279 AC093010.1-201ENST00000473625 1624 ntBASIC20.02■□□□□ 0.79
CTGFP29279 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTGFP29279 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CTGFP29279 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CTGFP29279 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.01■□□□□ 0.79
CTGFP29279 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.01■□□□□ 0.79
CTGFP29279 AC003669.1-201ENST00000334569 611 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms