Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CDH3P22223 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH3P22223 AL354751.1-201ENST00000412768 1863 ntBASIC17.56■□□□□ 0.4
CDH3P22223 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH3P22223 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH3P22223 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH3P22223 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDH3P22223 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH3P22223 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH3P22223 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH3P22223 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH3P22223 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH3P22223 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH3P22223 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDH3P22223 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH3P22223 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH3P22223 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH3P22223 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH3P22223 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDH3P22223 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH3P22223 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH3P22223 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CDH3P22223 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CDH3P22223 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH3P22223 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDH3P22223 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH3P22223 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.55■□□□□ 0.4
CDH3P22223 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CDH3P22223 AC090616.6-201ENST00000582640 721 ntBASIC17.55■□□□□ 0.4
CDH3P22223 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH3P22223 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH3P22223 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH3P22223 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH3P22223 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH3P22223 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH3P22223 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH3P22223 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH3P22223 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH3P22223 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH3P22223 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 AL353692.3-201ENST00000407031 1396 ntBASIC17.54■□□□□ 0.4
CDH3P22223 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 AC090164.3-201ENST00000610780 2143 ntBASIC17.54■□□□□ 0.4
CDH3P22223 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH3P22223 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDH3P22223 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH3P22223 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH3P22223 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH3P22223 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH3P22223 AP002383.4-201ENST00000442518 975 ntBASIC17.54■□□□□ 0.4
CDH3P22223 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.54■□□□□ 0.4
CDH3P22223 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH3P22223 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH3P22223 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH3P22223 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH3P22223 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH3P22223 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH3P22223 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH3P22223 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH3P22223 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
CDH3P22223 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH3P22223 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH3P22223 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH3P22223 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH3P22223 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH3P22223 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH3P22223 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH3P22223 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH3P22223 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH3P22223 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.53■□□□□ 0.4
CDH3P22223 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH3P22223 GUSBP12-201ENST00000513727 720 ntBASIC17.53■□□□□ 0.4
CDH3P22223 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDH3P22223 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH3P22223 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH3P22223 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH3P22223 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH3P22223 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH3P22223 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH3P22223 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms