Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 KRT8P9-201ENST00000558927 1449 ntBASIC16.65■□□□□ 0.26
TNFRSF1BP20333 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 AC009947.2-201ENST00000444014 672 ntBASIC16.65■□□□□ 0.26
TNFRSF1BP20333 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 TSPY15P-201ENST00000457163 923 ntBASIC16.65■□□□□ 0.26
TNFRSF1BP20333 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF1BP20333 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TNFRSF1BP20333 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TNFRSF1BP20333 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.64■□□□□ 0.25
TNFRSF1BP20333 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 SNORA78-201ENST00000459373 127 ntBASIC16.64■□□□□ 0.25
TNFRSF1BP20333 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 C2orf69P3-201ENST00000565542 1120 ntBASIC16.64■□□□□ 0.25
TNFRSF1BP20333 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 CYP2D8P-201ENST00000433633 1490 ntBASIC16.64■□□□□ 0.25
TNFRSF1BP20333 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF1BP20333 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 AC133963.1-201ENST00000504166 1679 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms