Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ERCC3P19447 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ERCC3P19447 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
ERCC3P19447 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.71■□□□□ 0.91
ERCC3P19447 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC3P19447 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
ERCC3P19447 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.71■□□□□ 0.91
ERCC3P19447 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC3P19447 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.71■□□□□ 0.91
ERCC3P19447 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.71■□□□□ 0.91
ERCC3P19447 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.71■□□□□ 0.91
ERCC3P19447 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC3P19447 AC139530.3-201ENST00000620344 690 ntBASIC20.71■□□□□ 0.91
ERCC3P19447 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ERCC3P19447 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC3P19447 AL031598.1-201ENST00000561511 1773 ntBASIC20.71■□□□□ 0.91
ERCC3P19447 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC3P19447 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC3P19447 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC3P19447 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC3P19447 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC3P19447 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.71■□□□□ 0.91
ERCC3P19447 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ERCC3P19447 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
ERCC3P19447 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ERCC3P19447 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC3P19447 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.7■□□□□ 0.9
ERCC3P19447 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC3P19447 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ERCC3P19447 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.7■□□□□ 0.9
ERCC3P19447 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.7■□□□□ 0.9
ERCC3P19447 RPL13AP23-201ENST00000480739 586 ntBASIC20.7■□□□□ 0.9
ERCC3P19447 POLD2P1-201ENST00000511220 997 ntBASIC20.7■□□□□ 0.9
ERCC3P19447 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.7■□□□□ 0.9
ERCC3P19447 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.7■□□□□ 0.9
ERCC3P19447 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.7■□□□□ 0.9
ERCC3P19447 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.7■□□□□ 0.9
ERCC3P19447 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.7■□□□□ 0.9
ERCC3P19447 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.7■□□□□ 0.9
ERCC3P19447 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.7■□□□□ 0.9
ERCC3P19447 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.7■□□□□ 0.9
ERCC3P19447 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC3P19447 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC3P19447 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
ERCC3P19447 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC3P19447 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.7■□□□□ 0.9
ERCC3P19447 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC3P19447 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.7■□□□□ 0.9
ERCC3P19447 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC3P19447 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC3P19447 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC3P19447 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.69■□□□□ 0.9
ERCC3P19447 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC3P19447 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
ERCC3P19447 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC3P19447 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.69■□□□□ 0.9
ERCC3P19447 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.69■□□□□ 0.9
ERCC3P19447 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC3P19447 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
ERCC3P19447 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.69■□□□□ 0.9
ERCC3P19447 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC3P19447 KRT18P13-201ENST00000400056 1290 ntBASIC20.69■□□□□ 0.9
ERCC3P19447 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.69■□□□□ 0.9
ERCC3P19447 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.69■□□□□ 0.9
ERCC3P19447 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.69■□□□□ 0.9
ERCC3P19447 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.69■□□□□ 0.9
ERCC3P19447 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.69■□□□□ 0.9
ERCC3P19447 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.69■□□□□ 0.9
ERCC3P19447 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.69■□□□□ 0.9
ERCC3P19447 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.69■□□□□ 0.9
ERCC3P19447 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.69■□□□□ 0.9
ERCC3P19447 AC116407.3-201ENST00000623905 1129 ntBASIC20.69■□□□□ 0.9
ERCC3P19447 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.69■□□□□ 0.9
ERCC3P19447 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC3P19447 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC3P19447 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.69■□□□□ 0.9
ERCC3P19447 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC3P19447 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
ERCC3P19447 AL138781.2-201ENST00000617896 1843 ntBASIC20.69■□□□□ 0.9
ERCC3P19447 AP005117.1-201ENST00000584346 1413 ntBASIC20.69■□□□□ 0.9
ERCC3P19447 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC3P19447 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.69■□□□□ 0.9
ERCC3P19447 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC3P19447 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC3P19447 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC3P19447 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.68■□□□□ 0.9
ERCC3P19447 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC3P19447 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ERCC3P19447 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ERCC3P19447 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC3P19447 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC3P19447 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC3P19447 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.68■□□□□ 0.9
ERCC3P19447 AC005082.1-201ENST00000413042 2259 ntBASIC20.68■□□□□ 0.9
ERCC3P19447 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC3P19447 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.68■□□□□ 0.9
ERCC3P19447 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
ERCC3P19447 KRT18P65-201ENST00000439811 1286 ntBASIC20.68■□□□□ 0.9
ERCC3P19447 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC3P19447 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms