Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC1P18887 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.87■□□□□ 0.45
XRCC1P18887 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.87■□□□□ 0.45
XRCC1P18887 TSPY22P-201ENST00000427496 604 ntBASIC17.87■□□□□ 0.45
XRCC1P18887 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC1P18887 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.87■□□□□ 0.45
XRCC1P18887 NPAP1P7-201ENST00000613027 823 ntBASIC17.87■□□□□ 0.45
XRCC1P18887 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.87■□□□□ 0.45
XRCC1P18887 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.87■□□□□ 0.45
XRCC1P18887 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.87■□□□□ 0.45
XRCC1P18887 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC1P18887 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
XRCC1P18887 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
XRCC1P18887 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC1P18887 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
XRCC1P18887 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.87■□□□□ 0.45
XRCC1P18887 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC1P18887 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC1P18887 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.87■□□□□ 0.45
XRCC1P18887 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.87■□□□□ 0.45
XRCC1P18887 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC1P18887 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.86■□□□□ 0.45
XRCC1P18887 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.86■□□□□ 0.45
XRCC1P18887 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC1P18887 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
XRCC1P18887 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
XRCC1P18887 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC1P18887 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC1P18887 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.86■□□□□ 0.45
XRCC1P18887 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC1P18887 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.86■□□□□ 0.45
XRCC1P18887 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.86■□□□□ 0.45
XRCC1P18887 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.86■□□□□ 0.45
XRCC1P18887 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC1P18887 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC1P18887 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.86■□□□□ 0.45
XRCC1P18887 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
XRCC1P18887 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.86■□□□□ 0.45
XRCC1P18887 TSSC2-201ENST00000450217 709 ntBASIC17.86■□□□□ 0.45
XRCC1P18887 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.86■□□□□ 0.45
XRCC1P18887 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.86■□□□□ 0.45
XRCC1P18887 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.86■□□□□ 0.45
XRCC1P18887 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.86■□□□□ 0.45
XRCC1P18887 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
XRCC1P18887 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.86■□□□□ 0.45
XRCC1P18887 AC005332.3-201ENST00000589904 676 ntBASIC17.86■□□□□ 0.45
XRCC1P18887 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC1P18887 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
XRCC1P18887 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
XRCC1P18887 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC1P18887 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC1P18887 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC1P18887 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC1P18887 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
XRCC1P18887 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.86■□□□□ 0.45
XRCC1P18887 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC1P18887 AC009102.3-201ENST00000623118 1491 ntBASIC17.86■□□□□ 0.45
XRCC1P18887 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC1P18887 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC1P18887 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.86■□□□□ 0.45
XRCC1P18887 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
XRCC1P18887 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC1P18887 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC1P18887 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC1P18887 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
XRCC1P18887 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC1P18887 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC1P18887 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC1P18887 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC1P18887 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
XRCC1P18887 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
XRCC1P18887 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC1P18887 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.85■□□□□ 0.45
XRCC1P18887 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC1P18887 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.85■□□□□ 0.45
XRCC1P18887 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC1P18887 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC1P18887 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
XRCC1P18887 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC1P18887 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.85■□□□□ 0.45
XRCC1P18887 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.85■□□□□ 0.45
XRCC1P18887 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.85■□□□□ 0.45
XRCC1P18887 HCG4P8-203ENST00000443049 980 ntBASIC17.85■□□□□ 0.45
XRCC1P18887 SIRPAP1-201ENST00000448467 1770 ntBASIC17.85■□□□□ 0.45
XRCC1P18887 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.85■□□□□ 0.45
XRCC1P18887 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
XRCC1P18887 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
XRCC1P18887 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC1P18887 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
XRCC1P18887 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.85■□□□□ 0.45
XRCC1P18887 KRT18P56-201ENST00000507275 550 ntBASIC17.85■□□□□ 0.45
XRCC1P18887 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.85■□□□□ 0.45
XRCC1P18887 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.85■□□□□ 0.45
XRCC1P18887 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.85■□□□□ 0.45
XRCC1P18887 AC080080.1-201ENST00000625121 2420 ntBASIC17.85■□□□□ 0.45
XRCC1P18887 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.85■□□□□ 0.45
XRCC1P18887 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
XRCC1P18887 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC1P18887 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC1P18887 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms