Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.74■□□□□ 0.11
ATF1P18846 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATF1P18846 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATF1P18846 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATF1P18846 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.74■□□□□ 0.11
ATF1P18846 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
ATF1P18846 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
ATF1P18846 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.74■□□□□ 0.11
ATF1P18846 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.74■□□□□ 0.11
ATF1P18846 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.74■□□□□ 0.11
ATF1P18846 WWOX-216ENST00000569818 525 ntBASIC15.74■□□□□ 0.11
ATF1P18846 CR769767.2-201ENST00000622735 460 ntBASIC15.74■□□□□ 0.11
ATF1P18846 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.74■□□□□ 0.11
ATF1P18846 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.74■□□□□ 0.11
ATF1P18846 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATF1P18846 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATF1P18846 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.74■□□□□ 0.11
ATF1P18846 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ATF1P18846 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATF1P18846 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATF1P18846 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATF1P18846 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ATF1P18846 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATF1P18846 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ATF1P18846 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATF1P18846 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATF1P18846 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATF1P18846 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATF1P18846 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATF1P18846 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATF1P18846 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
ATF1P18846 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATF1P18846 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATF1P18846 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATF1P18846 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.73■□□□□ 0.11
ATF1P18846 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
ATF1P18846 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATF1P18846 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.73■□□□□ 0.11
ATF1P18846 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATF1P18846 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATF1P18846 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.73■□□□□ 0.11
ATF1P18846 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATF1P18846 RBM17P1-201ENST00000453646 1190 ntBASIC15.73■□□□□ 0.11
ATF1P18846 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATF1P18846 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.73■□□□□ 0.11
ATF1P18846 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.73■□□□□ 0.11
ATF1P18846 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.73■□□□□ 0.11
ATF1P18846 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.73■□□□□ 0.11
ATF1P18846 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ATF1P18846 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.73■□□□□ 0.11
ATF1P18846 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATF1P18846 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATF1P18846 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATF1P18846 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATF1P18846 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.73■□□□□ 0.11
ATF1P18846 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.73■□□□□ 0.11
ATF1P18846 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
ATF1P18846 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.72■□□□□ 0.11
ATF1P18846 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.72■□□□□ 0.11
ATF1P18846 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATF1P18846 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ATF1P18846 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.72■□□□□ 0.11
ATF1P18846 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.72■□□□□ 0.11
ATF1P18846 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATF1P18846 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATF1P18846 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATF1P18846 UBALD1-205ENST00000590891 2641 ntBASIC15.72■□□□□ 0.11
ATF1P18846 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
ATF1P18846 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.72■□□□□ 0.11
ATF1P18846 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATF1P18846 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ATF1P18846 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
ATF1P18846 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ATF1P18846 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.72■□□□□ 0.11
ATF1P18846 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
ATF1P18846 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.72■□□□□ 0.11
ATF1P18846 CCR12P-201ENST00000446203 998 ntBASIC15.72■□□□□ 0.11
ATF1P18846 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.72■□□□□ 0.11
ATF1P18846 AC009065.1-201ENST00000564055 1225 ntBASIC15.72■□□□□ 0.11
ATF1P18846 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.72■□□□□ 0.11
ATF1P18846 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATF1P18846 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.72■□□□□ 0.11
ATF1P18846 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATF1P18846 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATF1P18846 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATF1P18846 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ATF1P18846 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATF1P18846 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ATF1P18846 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATF1P18846 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATF1P18846 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ATF1P18846 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATF1P18846 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATF1P18846 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATF1P18846 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.72■□□□□ 0.11
ATF1P18846 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATF1P18846 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATF1P18846 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
ATF1P18846 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.71■□□□□ 0.11
ATF1P18846 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms