Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFRAP16234 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFRAP16234 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PDGFRAP16234 AC005332.8-201ENST00000622750 2735 ntBASIC18.82■□□□□ 0.6
PDGFRAP16234 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFRAP16234 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFRAP16234 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
PDGFRAP16234 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFRAP16234 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
PDGFRAP16234 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.82■□□□□ 0.6
PDGFRAP16234 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.82■□□□□ 0.6
PDGFRAP16234 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFRAP16234 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PDGFRAP16234 AC012317.2-201ENST00000623305 2251 ntBASIC18.81■□□□□ 0.6
PDGFRAP16234 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PDGFRAP16234 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.81■□□□□ 0.6
PDGFRAP16234 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDGFRAP16234 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.81■□□□□ 0.6
PDGFRAP16234 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.81■□□□□ 0.6
PDGFRAP16234 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.81■□□□□ 0.6
PDGFRAP16234 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.81■□□□□ 0.6
PDGFRAP16234 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.81■□□□□ 0.6
PDGFRAP16234 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.81■□□□□ 0.6
PDGFRAP16234 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.81■□□□□ 0.6
PDGFRAP16234 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.81■□□□□ 0.6
PDGFRAP16234 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.81■□□□□ 0.6
PDGFRAP16234 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDGFRAP16234 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.81■□□□□ 0.6
PDGFRAP16234 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.81■□□□□ 0.6
PDGFRAP16234 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDGFRAP16234 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PDGFRAP16234 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.81■□□□□ 0.6
PDGFRAP16234 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFRAP16234 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.81■□□□□ 0.6
PDGFRAP16234 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
PDGFRAP16234 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.8■□□□□ 0.6
PDGFRAP16234 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PDGFRAP16234 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PDGFRAP16234 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.8■□□□□ 0.6
PDGFRAP16234 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.8■□□□□ 0.6
PDGFRAP16234 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.8■□□□□ 0.6
PDGFRAP16234 AC011498.5-201ENST00000592027 486 ntBASIC18.8■□□□□ 0.6
PDGFRAP16234 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PDGFRAP16234 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PDGFRAP16234 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.8■□□□□ 0.6
PDGFRAP16234 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFRAP16234 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFRAP16234 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFRAP16234 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.79■□□□□ 0.6
PDGFRAP16234 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFRAP16234 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.79■□□□□ 0.6
PDGFRAP16234 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFRAP16234 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.79■□□□□ 0.6
PDGFRAP16234 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.79■□□□□ 0.6
PDGFRAP16234 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFRAP16234 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFRAP16234 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.79■□□□□ 0.6
PDGFRAP16234 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFRAP16234 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.79■□□□□ 0.6
PDGFRAP16234 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.79■□□□□ 0.6
PDGFRAP16234 AC069148.1-201ENST00000608741 768 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms