Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT3P12035 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.9■□□□□ 0.62
KRT3P12035 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.9■□□□□ 0.62
KRT3P12035 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.9■□□□□ 0.62
KRT3P12035 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT3P12035 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.9■□□□□ 0.62
KRT3P12035 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT3P12035 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.9■□□□□ 0.62
KRT3P12035 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.9■□□□□ 0.62
KRT3P12035 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.9■□□□□ 0.62
KRT3P12035 AC083849.1-201ENST00000615227 514 ntBASIC18.9■□□□□ 0.62
KRT3P12035 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT3P12035 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT3P12035 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.9■□□□□ 0.62
KRT3P12035 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.9■□□□□ 0.62
KRT3P12035 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT3P12035 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT3P12035 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT3P12035 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT3P12035 AC006116.8-202ENST00000587620 1550 ntBASIC18.89■□□□□ 0.62
KRT3P12035 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
KRT3P12035 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT3P12035 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.89■□□□□ 0.61
KRT3P12035 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT3P12035 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT3P12035 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT3P12035 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT3P12035 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.89■□□□□ 0.61
KRT3P12035 TSPY12P-201ENST00000421279 868 ntBASIC18.89■□□□□ 0.61
KRT3P12035 SPDYE13P-201ENST00000445314 798 ntBASIC18.89■□□□□ 0.61
KRT3P12035 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.89■□□□□ 0.61
KRT3P12035 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.89■□□□□ 0.61
KRT3P12035 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.89■□□□□ 0.61
KRT3P12035 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT3P12035 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT3P12035 GPR32P1-201ENST00000601788 811 ntBASIC18.89■□□□□ 0.61
KRT3P12035 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT3P12035 AL353692.3-201ENST00000407031 1396 ntBASIC18.89■□□□□ 0.61
KRT3P12035 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.89■□□□□ 0.61
KRT3P12035 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT3P12035 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT3P12035 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT3P12035 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT3P12035 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT3P12035 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT3P12035 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT3P12035 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT3P12035 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT3P12035 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT3P12035 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT3P12035 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.88■□□□□ 0.61
KRT3P12035 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
KRT3P12035 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT3P12035 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT3P12035 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRT3P12035 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT3P12035 FAM210CP-201ENST00000445714 574 ntBASIC18.88■□□□□ 0.61
KRT3P12035 AC005332.3-201ENST00000589904 676 ntBASIC18.88■□□□□ 0.61
KRT3P12035 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
KRT3P12035 AC009154.2-201ENST00000621177 724 ntBASIC18.88■□□□□ 0.61
KRT3P12035 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT3P12035 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT3P12035 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT3P12035 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT3P12035 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT3P12035 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT3P12035 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT3P12035 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
KRT3P12035 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
KRT3P12035 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
KRT3P12035 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.88■□□□□ 0.61
KRT3P12035 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
KRT3P12035 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT3P12035 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT3P12035 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT3P12035 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT3P12035 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT3P12035 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
KRT3P12035 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT3P12035 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT3P12035 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT3P12035 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT3P12035 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT3P12035 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.87■□□□□ 0.61
KRT3P12035 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT3P12035 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT3P12035 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.87■□□□□ 0.61
KRT3P12035 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.87■□□□□ 0.61
KRT3P12035 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.87■□□□□ 0.61
KRT3P12035 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.87■□□□□ 0.61
KRT3P12035 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT3P12035 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.87■□□□□ 0.61
KRT3P12035 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.87■□□□□ 0.61
KRT3P12035 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.87■□□□□ 0.61
KRT3P12035 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
KRT3P12035 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.87■□□□□ 0.61
KRT3P12035 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT3P12035 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
KRT3P12035 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.87■□□□□ 0.61
KRT3P12035 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms