Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.11■□□□□ 0.49
CHRNB1P11230 AC211476.1-201ENST00000503899 468 ntBASIC18.11■□□□□ 0.49
CHRNB1P11230 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.11■□□□□ 0.49
CHRNB1P11230 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.11■□□□□ 0.49
CHRNB1P11230 AC006557.2-201ENST00000592985 1240 ntBASIC18.11■□□□□ 0.49
CHRNB1P11230 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.11■□□□□ 0.49
CHRNB1P11230 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.11■□□□□ 0.49
CHRNB1P11230 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNB1P11230 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNB1P11230 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.11■□□□□ 0.49
CHRNB1P11230 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CHRNB1P11230 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNB1P11230 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNB1P11230 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
CHRNB1P11230 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
CHRNB1P11230 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CHRNB1P11230 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNB1P11230 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNB1P11230 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNB1P11230 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNB1P11230 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
CHRNB1P11230 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CHRNB1P11230 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNB1P11230 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNB1P11230 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNB1P11230 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHRNB1P11230 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNB1P11230 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNB1P11230 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNB1P11230 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNB1P11230 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNB1P11230 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNB1P11230 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CHRNB1P11230 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNB1P11230 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.1■□□□□ 0.49
CHRNB1P11230 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.1■□□□□ 0.49
CHRNB1P11230 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.1■□□□□ 0.49
CHRNB1P11230 AP006288.1-201ENST00000446065 395 ntBASIC18.1■□□□□ 0.49
CHRNB1P11230 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.1■□□□□ 0.49
CHRNB1P11230 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.1■□□□□ 0.49
CHRNB1P11230 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNB1P11230 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.1■□□□□ 0.49
CHRNB1P11230 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.1■□□□□ 0.49
CHRNB1P11230 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CHRNB1P11230 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNB1P11230 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CHRNB1P11230 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CHRNB1P11230 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNB1P11230 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CHRNB1P11230 AC120498.9-201ENST00000339021 3867 ntBASIC18.1■□□□□ 0.49
CHRNB1P11230 AC098818.2-201ENST00000564925 2320 ntBASIC18.1■□□□□ 0.49
CHRNB1P11230 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNB1P11230 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.1■□□□□ 0.49
CHRNB1P11230 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.1■□□□□ 0.49
CHRNB1P11230 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNB1P11230 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNB1P11230 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNB1P11230 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHRNB1P11230 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNB1P11230 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNB1P11230 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CHRNB1P11230 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNB1P11230 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CHRNB1P11230 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CHRNB1P11230 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNB1P11230 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNB1P11230 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNB1P11230 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNB1P11230 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNB1P11230 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.09■□□□□ 0.49
CHRNB1P11230 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNB1P11230 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CHRNB1P11230 KRT18P2-201ENST00000447938 1258 ntBASIC18.09■□□□□ 0.49
CHRNB1P11230 AC108751.1-201ENST00000490852 363 ntBASIC18.09■□□□□ 0.49
CHRNB1P11230 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNB1P11230 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.09■□□□□ 0.49
CHRNB1P11230 AC004817.3-201ENST00000602957 2129 ntBASIC18.09■□□□□ 0.49
CHRNB1P11230 AD001527.2-201ENST00000622994 785 ntBASIC18.09■□□□□ 0.49
CHRNB1P11230 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNB1P11230 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNB1P11230 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNB1P11230 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHRNB1P11230 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CHRNB1P11230 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNB1P11230 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNB1P11230 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHRNB1P11230 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNB1P11230 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNB1P11230 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNB1P11230 AC116562.4-201ENST00000641316 2276 ntBASIC18.09■□□□□ 0.49
CHRNB1P11230 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.08■□□□□ 0.49
CHRNB1P11230 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNB1P11230 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNB1P11230 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CHRNB1P11230 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
CHRNB1P11230 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNB1P11230 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNB1P11230 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNB1P11230 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNB1P11230 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms