Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.05■□□□□ 0.48
RETP07949 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.05■□□□□ 0.48
RETP07949 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RETP07949 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.05■□□□□ 0.48
RETP07949 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.05■□□□□ 0.48
RETP07949 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.05■□□□□ 0.48
RETP07949 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.05■□□□□ 0.48
RETP07949 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RETP07949 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RETP07949 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.05■□□□□ 0.48
RETP07949 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RETP07949 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RETP07949 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RETP07949 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RETP07949 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RETP07949 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.04■□□□□ 0.48
RETP07949 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RETP07949 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.04■□□□□ 0.48
RETP07949 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RETP07949 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.04■□□□□ 0.48
RETP07949 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RETP07949 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.04■□□□□ 0.48
RETP07949 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RETP07949 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RETP07949 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.04■□□□□ 0.48
RETP07949 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RETP07949 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RETP07949 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RETP07949 AC211486.1-202ENST00000416371 468 ntBASIC18.04■□□□□ 0.48
RETP07949 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RETP07949 AP006288.1-201ENST00000446065 395 ntBASIC18.04■□□□□ 0.48
RETP07949 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.04■□□□□ 0.48
RETP07949 AC211476.1-201ENST00000503899 468 ntBASIC18.04■□□□□ 0.48
RETP07949 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
RETP07949 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RETP07949 AC005336.2-201ENST00000593183 939 ntBASIC18.04■□□□□ 0.48
RETP07949 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.04■□□□□ 0.48
RETP07949 AC008735.5-201ENST00000623544 497 ntBASIC18.04■□□□□ 0.48
RETP07949 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RETP07949 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RETP07949 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RETP07949 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.04■□□□□ 0.48
RETP07949 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.04■□□□□ 0.48
RETP07949 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.04■□□□□ 0.48
RETP07949 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RETP07949 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RETP07949 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RETP07949 INTS4P1-201ENST00000438455 1935 ntBASIC18.04■□□□□ 0.48
RETP07949 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RETP07949 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RETP07949 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.03■□□□□ 0.48
RETP07949 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RETP07949 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RETP07949 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RETP07949 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.03■□□□□ 0.48
RETP07949 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RETP07949 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RETP07949 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
RETP07949 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.03■□□□□ 0.48
RETP07949 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.03■□□□□ 0.48
RETP07949 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.03■□□□□ 0.48
RETP07949 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RETP07949 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.03■□□□□ 0.48
RETP07949 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RETP07949 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RETP07949 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.03■□□□□ 0.48
RETP07949 AC012640.2-201ENST00000561606 901 ntBASIC18.03■□□□□ 0.48
RETP07949 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.03■□□□□ 0.48
RETP07949 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.03■□□□□ 0.48
RETP07949 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.03■□□□□ 0.48
RETP07949 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RETP07949 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RETP07949 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RETP07949 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RETP07949 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RETP07949 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.03■□□□□ 0.48
RETP07949 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.03■□□□□ 0.48
RETP07949 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RETP07949 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RETP07949 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.03■□□□□ 0.48
RETP07949 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RETP07949 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.03■□□□□ 0.48
RETP07949 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RETP07949 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.02■□□□□ 0.48
RETP07949 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RETP07949 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RETP07949 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.02■□□□□ 0.48
RETP07949 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RETP07949 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RETP07949 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RETP07949 AL356309.3-201ENST00000624132 1934 ntBASIC18.02■□□□□ 0.48
RETP07949 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RETP07949 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RETP07949 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RETP07949 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RETP07949 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RETP07949 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RETP07949 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RETP07949 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RETP07949 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms