Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 AL845331.1-201ENST00000424978 1190 ntBASIC18.17■□□□□ 0.5
HLA-DQB2P05538 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 IGHV3-41-201ENST00000613121 348 ntBASIC18.17■□□□□ 0.5
HLA-DQB2P05538 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HLA-DQB2P05538 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 PCDHB18P-201ENST00000524813 2368 ntBASIC18.16■□□□□ 0.5
HLA-DQB2P05538 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 CHCHD2P8-201ENST00000429873 447 ntBASIC18.16■□□□□ 0.5
HLA-DQB2P05538 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 AC090616.6-201ENST00000582640 721 ntBASIC18.16■□□□□ 0.5
HLA-DQB2P05538 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
HLA-DQB2P05538 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQB2P05538 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HLA-DQB2P05538 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
HLA-DQB2P05538 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.14■□□□□ 0.5
HLA-DQB2P05538 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
HLA-DQB2P05538 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HLA-DQB2P05538 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HLA-DQB2P05538 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms