Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CLPTM1O96005 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLPTM1O96005 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLPTM1O96005 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLPTM1O96005 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLPTM1O96005 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLPTM1O96005 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLPTM1O96005 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.95■□□□□ 0.3
CLPTM1O96005 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLPTM1O96005 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.95■□□□□ 0.3
CLPTM1O96005 AGGF1P2-201ENST00000426656 2106 ntBASIC16.95■□□□□ 0.3
CLPTM1O96005 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.95■□□□□ 0.3
CLPTM1O96005 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.95■□□□□ 0.3
CLPTM1O96005 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.95■□□□□ 0.3
CLPTM1O96005 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.95■□□□□ 0.3
CLPTM1O96005 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.95■□□□□ 0.3
CLPTM1O96005 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.95■□□□□ 0.3
CLPTM1O96005 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLPTM1O96005 AC124016.1-201ENST00000609552 612 ntBASIC16.95■□□□□ 0.3
CLPTM1O96005 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CLPTM1O96005 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.95■□□□□ 0.3
CLPTM1O96005 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLPTM1O96005 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.95■□□□□ 0.3
CLPTM1O96005 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLPTM1O96005 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CLPTM1O96005 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLPTM1O96005 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLPTM1O96005 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLPTM1O96005 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLPTM1O96005 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CLPTM1O96005 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.94■□□□□ 0.3
CLPTM1O96005 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.94■□□□□ 0.3
CLPTM1O96005 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLPTM1O96005 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLPTM1O96005 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLPTM1O96005 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLPTM1O96005 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.94■□□□□ 0.3
CLPTM1O96005 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.94■□□□□ 0.3
CLPTM1O96005 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLPTM1O96005 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CLPTM1O96005 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLPTM1O96005 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLPTM1O96005 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.94■□□□□ 0.3
CLPTM1O96005 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.94■□□□□ 0.3
CLPTM1O96005 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.94■□□□□ 0.3
CLPTM1O96005 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.94■□□□□ 0.3
CLPTM1O96005 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.94■□□□□ 0.3
CLPTM1O96005 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CLPTM1O96005 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLPTM1O96005 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CLPTM1O96005 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CLPTM1O96005 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.94■□□□□ 0.3
CLPTM1O96005 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLPTM1O96005 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLPTM1O96005 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.94■□□□□ 0.3
CLPTM1O96005 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CLPTM1O96005 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CLPTM1O96005 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.93■□□□□ 0.3
CLPTM1O96005 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLPTM1O96005 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.93■□□□□ 0.3
CLPTM1O96005 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLPTM1O96005 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLPTM1O96005 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLPTM1O96005 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CLPTM1O96005 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLPTM1O96005 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.93■□□□□ 0.3
CLPTM1O96005 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLPTM1O96005 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLPTM1O96005 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLPTM1O96005 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CLPTM1O96005 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLPTM1O96005 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLPTM1O96005 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CLPTM1O96005 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLPTM1O96005 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.93■□□□□ 0.3
CLPTM1O96005 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.93■□□□□ 0.3
CLPTM1O96005 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.93■□□□□ 0.3
CLPTM1O96005 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.93■□□□□ 0.3
CLPTM1O96005 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.93■□□□□ 0.3
CLPTM1O96005 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.93■□□□□ 0.3
CLPTM1O96005 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLPTM1O96005 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.93■□□□□ 0.3
CLPTM1O96005 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.93■□□□□ 0.3
CLPTM1O96005 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLPTM1O96005 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.93■□□□□ 0.3
CLPTM1O96005 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.93■□□□□ 0.3
CLPTM1O96005 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.93■□□□□ 0.3
CLPTM1O96005 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLPTM1O96005 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLPTM1O96005 KRT8P8-201ENST00000434750 1448 ntBASIC16.93■□□□□ 0.3
CLPTM1O96005 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLPTM1O96005 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLPTM1O96005 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.93■□□□□ 0.3
CLPTM1O96005 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CLPTM1O96005 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CLPTM1O96005 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLPTM1O96005 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLPTM1O96005 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLPTM1O96005 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLPTM1O96005 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms