Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.42□□□□□ -0.26
SH2D1AO60880 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.42□□□□□ -0.26
SH2D1AO60880 AF186192.3-201ENST00000583427 947 ntBASIC13.42□□□□□ -0.26
SH2D1AO60880 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.42□□□□□ -0.26
SH2D1AO60880 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SH2D1AO60880 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SH2D1AO60880 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SH2D1AO60880 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SH2D1AO60880 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SH2D1AO60880 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SH2D1AO60880 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SH2D1AO60880 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SH2D1AO60880 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.42□□□□□ -0.26
SH2D1AO60880 AC096733.2-201ENST00000609937 1394 ntBASIC13.42□□□□□ -0.26
SH2D1AO60880 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.42□□□□□ -0.26
SH2D1AO60880 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SH2D1AO60880 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SH2D1AO60880 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.42□□□□□ -0.26
SH2D1AO60880 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SH2D1AO60880 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.42□□□□□ -0.26
SH2D1AO60880 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.41□□□□□ -0.26
SH2D1AO60880 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SH2D1AO60880 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.41□□□□□ -0.26
SH2D1AO60880 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SH2D1AO60880 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SH2D1AO60880 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SH2D1AO60880 HOXB1-202ENST00000577092 1414 ntBASIC13.41□□□□□ -0.26
SH2D1AO60880 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
SH2D1AO60880 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SH2D1AO60880 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.41□□□□□ -0.26
SH2D1AO60880 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SH2D1AO60880 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SH2D1AO60880 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.41□□□□□ -0.26
SH2D1AO60880 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SH2D1AO60880 MESTP1-201ENST00000404287 994 ntBASIC13.41□□□□□ -0.26
SH2D1AO60880 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.41□□□□□ -0.26
SH2D1AO60880 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.41□□□□□ -0.26
SH2D1AO60880 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.41□□□□□ -0.26
SH2D1AO60880 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.41□□□□□ -0.26
SH2D1AO60880 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.41□□□□□ -0.26
SH2D1AO60880 AC009065.1-201ENST00000564055 1225 ntBASIC13.41□□□□□ -0.26
SH2D1AO60880 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.41□□□□□ -0.26
SH2D1AO60880 SLC25A1P4-201ENST00000567977 778 ntBASIC13.41□□□□□ -0.26
SH2D1AO60880 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.41□□□□□ -0.26
SH2D1AO60880 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SH2D1AO60880 AL024508.2-201ENST00000607749 1894 ntBASIC13.41□□□□□ -0.26
SH2D1AO60880 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SH2D1AO60880 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SH2D1AO60880 AC100803.2-201ENST00000562459 1963 ntBASIC13.41□□□□□ -0.26
SH2D1AO60880 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SH2D1AO60880 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SH2D1AO60880 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SH2D1AO60880 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
SH2D1AO60880 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SH2D1AO60880 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.41□□□□□ -0.26
SH2D1AO60880 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.41□□□□□ -0.26
SH2D1AO60880 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SH2D1AO60880 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SH2D1AO60880 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SH2D1AO60880 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.4□□□□□ -0.26
SH2D1AO60880 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SH2D1AO60880 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SH2D1AO60880 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SH2D1AO60880 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SH2D1AO60880 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
SH2D1AO60880 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SH2D1AO60880 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SH2D1AO60880 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SH2D1AO60880 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.4□□□□□ -0.26
SH2D1AO60880 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SH2D1AO60880 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SH2D1AO60880 ESRRAP1-201ENST00000400596 1257 ntBASIC13.4□□□□□ -0.26
SH2D1AO60880 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SH2D1AO60880 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
SH2D1AO60880 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SH2D1AO60880 DUTP2-201ENST00000519164 463 ntBASIC13.4□□□□□ -0.26
SH2D1AO60880 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.4□□□□□ -0.26
SH2D1AO60880 MIR4674-201ENST00000582457 87 ntBASIC13.4□□□□□ -0.26
SH2D1AO60880 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.4□□□□□ -0.26
SH2D1AO60880 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SH2D1AO60880 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SH2D1AO60880 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.4□□□□□ -0.26
SH2D1AO60880 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SH2D1AO60880 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
SH2D1AO60880 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SH2D1AO60880 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SH2D1AO60880 AL118508.1-201ENST00000613502 2345 ntBASIC13.4□□□□□ -0.26
SH2D1AO60880 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.4□□□□□ -0.26
SH2D1AO60880 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SH2D1AO60880 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SH2D1AO60880 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SH2D1AO60880 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SH2D1AO60880 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.4□□□□□ -0.26
SH2D1AO60880 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
SH2D1AO60880 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SH2D1AO60880 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.4□□□□□ -0.27
SH2D1AO60880 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SH2D1AO60880 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SH2D1AO60880 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SH2D1AO60880 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms