Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH7O60245 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCDH7O60245 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH7O60245 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH7O60245 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH7O60245 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH7O60245 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH7O60245 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH7O60245 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH7O60245 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH7O60245 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH7O60245 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH7O60245 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH7O60245 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH7O60245 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDH7O60245 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH7O60245 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH7O60245 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH7O60245 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDH7O60245 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH7O60245 FAM8A6P-201ENST00000407496 1135 ntBASIC17.13■□□□□ 0.33
PCDH7O60245 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH7O60245 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH7O60245 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDH7O60245 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.13■□□□□ 0.33
PCDH7O60245 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDH7O60245 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH7O60245 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDH7O60245 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDH7O60245 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDH7O60245 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH7O60245 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDH7O60245 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDH7O60245 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDH7O60245 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH7O60245 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH7O60245 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH7O60245 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH7O60245 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDH7O60245 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDH7O60245 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH7O60245 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDH7O60245 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PCDH7O60245 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDH7O60245 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDH7O60245 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
PCDH7O60245 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDH7O60245 HLA-F-220ENST00000434407 884 ntBASIC17.12■□□□□ 0.33
PCDH7O60245 KRT18P48-201ENST00000434763 852 ntBASIC17.12■□□□□ 0.33
PCDH7O60245 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDH7O60245 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDH7O60245 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDH7O60245 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.12■□□□□ 0.33
PCDH7O60245 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.12■□□□□ 0.33
PCDH7O60245 LINC01023-201ENST00000606054 436 ntBASIC17.12■□□□□ 0.33
PCDH7O60245 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PCDH7O60245 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDH7O60245 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PCDH7O60245 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH7O60245 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH7O60245 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDH7O60245 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCDH7O60245 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH7O60245 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 KRT18P65-201ENST00000439811 1286 ntBASIC17.11■□□□□ 0.33
PCDH7O60245 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.11■□□□□ 0.33
PCDH7O60245 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 AC092597.1-201ENST00000487352 616 ntBASIC17.11■□□□□ 0.33
PCDH7O60245 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms