Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC30.39■■■□□ 2.46
CUX2O14529 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CUX2O14529 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC30.39■■■□□ 2.46
CUX2O14529 AC079776.1-201ENST00000401540 1152 ntBASIC30.39■■■□□ 2.46
CUX2O14529 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CUX2O14529 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC30.39■■■□□ 2.46
CUX2O14529 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC30.39■■■□□ 2.46
CUX2O14529 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC30.39■■■□□ 2.46
CUX2O14529 Six3os1_5.1-201ENST00000611000 271 ntBASIC30.39■■■□□ 2.46
CUX2O14529 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CUX2O14529 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC30.39■■■□□ 2.46
CUX2O14529 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
CUX2O14529 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
CUX2O14529 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC30.39■■■□□ 2.45
CUX2O14529 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.45
CUX2O14529 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC30.39■■■□□ 2.45
CUX2O14529 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC30.39■■■□□ 2.45
CUX2O14529 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC30.39■■■□□ 2.45
CUX2O14529 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
CUX2O14529 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CUX2O14529 RPL30-202ENST00000396070 440 ntTSL 2 BASIC30.38■■■□□ 2.45
CUX2O14529 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
CUX2O14529 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
CUX2O14529 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CUX2O14529 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CUX2O14529 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
CUX2O14529 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
CUX2O14529 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CUX2O14529 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CUX2O14529 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CUX2O14529 AC006116.8-202ENST00000587620 1550 ntBASIC30.38■■■□□ 2.45
CUX2O14529 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CUX2O14529 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CUX2O14529 KRT18P32-201ENST00000424695 1287 ntBASIC30.38■■■□□ 2.45
CUX2O14529 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC30.38■■■□□ 2.45
CUX2O14529 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC30.38■■■□□ 2.45
CUX2O14529 KRT18P65-201ENST00000439811 1286 ntBASIC30.38■■■□□ 2.45
CUX2O14529 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CUX2O14529 IGHV3-42-201ENST00000520410 361 ntBASIC30.38■■■□□ 2.45
CUX2O14529 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC30.38■■■□□ 2.45
CUX2O14529 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC30.38■■■□□ 2.45
CUX2O14529 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC30.38■■■□□ 2.45
CUX2O14529 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
CUX2O14529 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
CUX2O14529 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
CUX2O14529 AC009102.3-201ENST00000623118 1491 ntBASIC30.37■■■□□ 2.45
CUX2O14529 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CUX2O14529 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC30.37■■■□□ 2.45
CUX2O14529 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
CUX2O14529 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CUX2O14529 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CUX2O14529 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CUX2O14529 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC30.37■■■□□ 2.45
CUX2O14529 AL355306.1-201ENST00000415580 579 ntBASIC30.37■■■□□ 2.45
CUX2O14529 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC30.37■■■□□ 2.45
CUX2O14529 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC30.37■■■□□ 2.45
CUX2O14529 AC112191.1-201ENST00000523689 701 ntBASIC30.37■■■□□ 2.45
CUX2O14529 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC30.37■■■□□ 2.45
CUX2O14529 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CUX2O14529 AC009118.2-201ENST00000613275 655 ntBASIC30.37■■■□□ 2.45
CUX2O14529 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC30.37■■■□□ 2.45
CUX2O14529 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC30.37■■■□□ 2.45
CUX2O14529 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC30.36■■■□□ 2.45
CUX2O14529 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC30.36■■■□□ 2.45
CUX2O14529 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC30.36■■■□□ 2.45
CUX2O14529 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CUX2O14529 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CUX2O14529 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
CUX2O14529 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CUX2O14529 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CUX2O14529 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
CUX2O14529 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC30.36■■■□□ 2.45
CUX2O14529 MRPS18AP1-201ENST00000414458 589 ntBASIC30.36■■■□□ 2.45
CUX2O14529 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC30.36■■■□□ 2.45
CUX2O14529 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC30.36■■■□□ 2.45
CUX2O14529 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC30.36■■■□□ 2.45
CUX2O14529 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CUX2O14529 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC30.36■■■□□ 2.45
CUX2O14529 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC30.36■■■□□ 2.45
CUX2O14529 AC026120.1-201ENST00000611536 926 ntBASIC30.36■■■□□ 2.45
CUX2O14529 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CUX2O14529 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC30.35■■■□□ 2.45
CUX2O14529 AL158211.5-201ENST00000623583 2518 ntBASIC30.35■■■□□ 2.45
CUX2O14529 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CUX2O14529 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC30.35■■■□□ 2.45
CUX2O14529 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CUX2O14529 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CUX2O14529 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC30.35■■■□□ 2.45
CUX2O14529 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC30.35■■■□□ 2.45
CUX2O14529 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CUX2O14529 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CUX2O14529 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CUX2O14529 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
CUX2O14529 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CUX2O14529 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CUX2O14529 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CUX2O14529 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC30.34■■■□□ 2.45
CUX2O14529 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC30.34■■■□□ 2.45
CUX2O14529 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC30.34■■■□□ 2.45
CUX2O14529 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms