Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AC133041.1-202ENST00000642053 222 ntBASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 AL031985.4-201ENST00000642138 673 ntBASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 DOC2GP-204ENST00000639052 2548 ntBASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 AC132938.6-201ENST00000623828 1655 ntBASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 KRT16P1-201ENST00000399124 1418 ntBASIC15.77■□□□□ 0.12
TRDV1A0A1B0GX56 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.77■□□□□ 0.12
TRDV1A0A1B0GX56 KRT8P7-201ENST00000533003 1432 ntBASIC15.77■□□□□ 0.12
TRDV1A0A1B0GX56 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.77■□□□□ 0.12
TRDV1A0A1B0GX56 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRDV1A0A1B0GX56 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRDV1A0A1B0GX56 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRDV1A0A1B0GX56 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.77■□□□□ 0.12
TRDV1A0A1B0GX56 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.77■□□□□ 0.12
TRDV1A0A1B0GX56 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRDV1A0A1B0GX56 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.77■□□□□ 0.12
TRDV1A0A1B0GX56 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TRDV1A0A1B0GX56 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRDV1A0A1B0GX56 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRDV1A0A1B0GX56 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRDV1A0A1B0GX56 AC009065.1-201ENST00000564055 1225 ntBASIC15.77■□□□□ 0.12
TRDV1A0A1B0GX56 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.77■□□□□ 0.12
TRDV1A0A1B0GX56 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRDV1A0A1B0GX56 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRDV1A0A1B0GX56 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRDV1A0A1B0GX56 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.77■□□□□ 0.11
TRDV1A0A1B0GX56 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRDV1A0A1B0GX56 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.77■□□□□ 0.11
TRDV1A0A1B0GX56 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRDV1A0A1B0GX56 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
TRDV1A0A1B0GX56 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRDV1A0A1B0GX56 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRDV1A0A1B0GX56 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.77■□□□□ 0.11
TRDV1A0A1B0GX56 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRDV1A0A1B0GX56 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRDV1A0A1B0GX56 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRDV1A0A1B0GX56 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRDV1A0A1B0GX56 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRDV1A0A1B0GX56 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRDV1A0A1B0GX56 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 IKBKGP1-201ENST00000612193 1073 ntBASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
TRDV1A0A1B0GX56 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRDV1A0A1B0GX56 AL162727.3-201ENST00000635661 2787 ntBASIC15.75■□□□□ 0.11
TRDV1A0A1B0GX56 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRDV1A0A1B0GX56 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRDV1A0A1B0GX56 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRDV1A0A1B0GX56 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
TRDV1A0A1B0GX56 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRDV1A0A1B0GX56 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRDV1A0A1B0GX56 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRDV1A0A1B0GX56 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms