Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 PVRIG2P-201ENST00000435460 978 ntBASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 AC093827.2-201ENST00000512654 315 ntBASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 AP000523.1-201ENST00000398242 1049 ntBASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 AC008687.5-201ENST00000593746 558 ntBASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV27A0A087WT01 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 KRT18P22-201ENST00000402024 1347 ntBASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 GCSHP2-201ENST00000560971 527 ntBASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 AC141257.4-201ENST00000634557 245 ntBASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 AC136944.6-201ENST00000634818 245 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms