Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 AL355075.4-201ENST00000554988 638 ntBASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 AL024508.2-201ENST00000607749 1894 ntBASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 HMGA1P5-201ENST00000412453 271 ntBASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 MIR4497-201ENST00000583208 89 ntBASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV30A0A087WSZ9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 MMP23A-201ENST00000234610 1017 ntBASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
TRAV30A0A087WSZ9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms