Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 AL020989.1-201ENST00000422979 469 ntBASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 AC006504.4-201ENST00000592118 1568 ntBASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 MIR4751-201ENST00000578027 74 ntBASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC2Q9Y5Z7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.64■□□□□ 0.58
HCFC2Q9Y5Z7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HCFC2Q9Y5Z7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 COX5BP2-201ENST00000392354 334 ntBASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 AC254562.1-201ENST00000417586 456 ntBASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 AC108073.2-201ENST00000464002 357 ntBASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 AC018845.2-201ENST00000568326 409 ntBASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.64■□□□□ 0.57
HCFC2Q9Y5Z7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 SIRPAP1-201ENST00000448467 1770 ntBASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 CYMP-203ENST00000474680 1263 ntBASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 RFPL4AP1-201ENST00000530883 850 ntBASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms