Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 IGHV3-65-201ENST00000523210 341 ntBASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 HTR5BP-201ENST00000430851 1154 ntBASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 MKNK2P1-201ENST00000437526 628 ntBASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 MIR4751-201ENST00000578027 74 ntBASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCN10AQ9Y5Y9 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SCN10AQ9Y5Y9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN10AQ9Y5Y9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN10AQ9Y5Y9 GPR89P-201ENST00000407924 1495 ntBASIC19.49■□□□□ 0.71
SCN10AQ9Y5Y9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN10AQ9Y5Y9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN10AQ9Y5Y9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.49■□□□□ 0.71
SCN10AQ9Y5Y9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.49■□□□□ 0.71
SCN10AQ9Y5Y9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN10AQ9Y5Y9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.49■□□□□ 0.71
SCN10AQ9Y5Y9 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.49■□□□□ 0.71
SCN10AQ9Y5Y9 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.49■□□□□ 0.71
SCN10AQ9Y5Y9 AL513190.1-201ENST00000621254 727 ntBASIC19.49■□□□□ 0.71
SCN10AQ9Y5Y9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.49■□□□□ 0.71
SCN10AQ9Y5Y9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SCN10AQ9Y5Y9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN10AQ9Y5Y9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SCN10AQ9Y5Y9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SCN10AQ9Y5Y9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 AC093677.2-201ENST00000600169 1863 ntBASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 IGLL3P-201ENST00000412472 434 ntBASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 AC005829.1-201ENST00000570002 483 ntBASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 AC027612.4-201ENST00000605371 583 ntBASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 AC010507.1-201ENST00000633895 436 ntBASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN10AQ9Y5Y9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 AL078644.1-201ENST00000609881 752 ntBASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 C20orf181-201ENST00000623918 480 ntBASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 AC009949.1-201ENST00000623048 1830 ntBASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms