Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAI2Q9Y5P3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAI2Q9Y5P3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAI2Q9Y5P3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.14■□□□□ 0.5
RAI2Q9Y5P3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
RAI2Q9Y5P3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 AP002383.4-201ENST00000442518 975 ntBASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 MTCL1P1-201ENST00000446207 792 ntBASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 AC111152.3-201ENST00000569699 673 ntBASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 KRT18P1-202ENST00000452408 1331 ntBASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAI2Q9Y5P3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 AC112698.1-201ENST00000510299 916 ntBASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 AP002414.4-201ENST00000589764 1148 ntBASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 AC092329.2-201ENST00000598402 547 ntBASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 NOC2LP1-202ENST00000452600 2235 ntBASIC18.13■□□□□ 0.49
RAI2Q9Y5P3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms