Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 AC010653.2-201ENST00000623505 997 ntBASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 AC093677.2-201ENST00000600169 1863 ntBASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HHLA3Q9XRX5 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 AC092338.2-201ENST00000568827 1415 ntBASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 MIR564-202ENST00000385049 94 ntBASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 MIR3180-5-201ENST00000583743 153 ntBASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HHLA3Q9XRX5 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
HHLA3Q9XRX5 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
HHLA3Q9XRX5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 AC007663.1-201ENST00000438948 1240 ntBASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 AL512604.3-201ENST00000569583 964 ntBASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 CYP2D8P-201ENST00000433633 1490 ntBASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.14□□□□□ -0.31
HHLA3Q9XRX5 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms