Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 AC004832.2-201ENST00000426397 482 ntBASIC23.32■■□□□ 1.32
SPG7Q9UQ90 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
SPG7Q9UQ90 AC112482.1-201ENST00000492080 688 ntBASIC23.32■■□□□ 1.32
SPG7Q9UQ90 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC23.32■■□□□ 1.32
SPG7Q9UQ90 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC23.32■■□□□ 1.32
SPG7Q9UQ90 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
SPG7Q9UQ90 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC23.32■■□□□ 1.32
SPG7Q9UQ90 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SPG7Q9UQ90 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SPG7Q9UQ90 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SPG7Q9UQ90 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
SPG7Q9UQ90 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC23.32■■□□□ 1.32
SPG7Q9UQ90 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SPG7Q9UQ90 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SPG7Q9UQ90 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 AC136632.2-201ENST00000512891 861 ntBASIC23.31■■□□□ 1.32
SPG7Q9UQ90 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 AL589182.2-201ENST00000619332 1049 ntBASIC23.31■■□□□ 1.32
SPG7Q9UQ90 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 AC073592.3-201ENST00000625118 1834 ntBASIC23.31■■□□□ 1.32
SPG7Q9UQ90 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
SPG7Q9UQ90 MED29-202ENST00000594368 1471 ntTSL 2 BASIC23.3■■□□□ 1.32
SPG7Q9UQ90 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SPG7Q9UQ90 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SPG7Q9UQ90 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SPG7Q9UQ90 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SPG7Q9UQ90 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
SPG7Q9UQ90 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SPG7Q9UQ90 SLC4A1APP2-201ENST00000424054 1259 ntBASIC23.3■■□□□ 1.32
SPG7Q9UQ90 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SPG7Q9UQ90 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC23.3■■□□□ 1.32
SPG7Q9UQ90 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
SPG7Q9UQ90 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC23.3■■□□□ 1.32
SPG7Q9UQ90 AC002347.1-201ENST00000569543 541 ntBASIC23.3■■□□□ 1.32
SPG7Q9UQ90 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SPG7Q9UQ90 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SPG7Q9UQ90 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SPG7Q9UQ90 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SPG7Q9UQ90 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SPG7Q9UQ90 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SPG7Q9UQ90 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SPG7Q9UQ90 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 AL020989.1-201ENST00000422979 469 ntBASIC23.29■■□□□ 1.32
SPG7Q9UQ90 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 NKTR-203ENST00000442970 646 ntTSL 2 BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 AC108751.1-201ENST00000490852 363 ntBASIC23.29■■□□□ 1.32
SPG7Q9UQ90 DHDH-204ENST00000523250 634 ntTSL 5 BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SPG7Q9UQ90 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms