Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 AL353135.1-201ENST00000606729 504 ntBASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 AC004877.2-201ENST00000623941 599 ntBASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 AC105339.1-204ENST00000636249 355 ntBASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 NCF1C-201ENST00000438382 1427 ntBASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 AC141586.3-201ENST00000562166 1838 ntBASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 AC004817.3-201ENST00000602957 2129 ntBASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZC3H4Q9UPT8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 RHOQP3-201ENST00000437982 621 ntBASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 AC098818.2-201ENST00000564925 2320 ntBASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 AC004790.2-201ENST00000623588 572 ntBASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3H4Q9UPT8 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.58■■□□□ 1.05
ZC3H4Q9UPT8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ZC3H4Q9UPT8 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.58■■□□□ 1.05
ZC3H4Q9UPT8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.58■■□□□ 1.05
ZC3H4Q9UPT8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ZC3H4Q9UPT8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.58■■□□□ 1.05
ZC3H4Q9UPT8 AC091812.2-201ENST00000619081 385 ntBASIC21.58■■□□□ 1.05
ZC3H4Q9UPT8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.58■■□□□ 1.05
ZC3H4Q9UPT8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.58■■□□□ 1.05
ZC3H4Q9UPT8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZC3H4Q9UPT8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZC3H4Q9UPT8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
ZC3H4Q9UPT8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ZC3H4Q9UPT8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZC3H4Q9UPT8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZC3H4Q9UPT8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.58■■□□□ 1.04
ZC3H4Q9UPT8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ZC3H4Q9UPT8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.58■■□□□ 1.04
ZC3H4Q9UPT8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZC3H4Q9UPT8 BCAR1-209ENST00000546196 1340 ntBASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 AC018445.3-201ENST00000624177 1945 ntBASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 AC096633.1-201ENST00000422446 749 ntBASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 GAPDHP21-201ENST00000450301 1010 ntBASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms