Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
COL17A1Q9UMD9 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
COL17A1Q9UMD9 GOLGA6L11P-201ENST00000417252 1298 ntBASIC26.96■■□□□ 1.91
COL17A1Q9UMD9 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC26.96■■□□□ 1.91
COL17A1Q9UMD9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC26.96■■□□□ 1.91
COL17A1Q9UMD9 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC26.96■■□□□ 1.91
COL17A1Q9UMD9 SPDYE22P-201ENST00000582158 798 ntBASIC26.96■■□□□ 1.91
COL17A1Q9UMD9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC26.96■■□□□ 1.91
COL17A1Q9UMD9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
COL17A1Q9UMD9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
COL17A1Q9UMD9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
COL17A1Q9UMD9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
COL17A1Q9UMD9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC26.96■■□□□ 1.91
COL17A1Q9UMD9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC26.96■■□□□ 1.91
COL17A1Q9UMD9 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
COL17A1Q9UMD9 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC26.96■■□□□ 1.91
COL17A1Q9UMD9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC26.96■■□□□ 1.91
COL17A1Q9UMD9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC26.95■■□□□ 1.91
COL17A1Q9UMD9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC26.95■■□□□ 1.91
COL17A1Q9UMD9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.91
COL17A1Q9UMD9 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
COL17A1Q9UMD9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC26.95■■□□□ 1.91
COL17A1Q9UMD9 AL020989.1-201ENST00000422979 469 ntBASIC26.95■■□□□ 1.91
COL17A1Q9UMD9 CNN2P2-201ENST00000443536 909 ntBASIC26.95■■□□□ 1.91
COL17A1Q9UMD9 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC26.95■■□□□ 1.91
COL17A1Q9UMD9 CNN2P3-201ENST00000450201 906 ntBASIC26.95■■□□□ 1.91
COL17A1Q9UMD9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.91
COL17A1Q9UMD9 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC26.95■■□□□ 1.91
COL17A1Q9UMD9 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC26.95■■□□□ 1.91
COL17A1Q9UMD9 AL136317.3-201ENST00000618497 906 ntBASIC26.95■■□□□ 1.91
COL17A1Q9UMD9 AC025048.6-201ENST00000634326 1161 ntBASIC26.95■■□□□ 1.91
COL17A1Q9UMD9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
COL17A1Q9UMD9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC26.95■■□□□ 1.9
COL17A1Q9UMD9 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 MIR943-201ENST00000401286 94 ntBASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 ARSEP1-201ENST00000420443 635 ntBASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 NME2P1-201ENST00000426182 414 ntBASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 GPS2P2-201ENST00000430745 888 ntBASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
COL17A1Q9UMD9 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 AC132938.5-201ENST00000624980 1813 ntBASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 AFG3L1P-217ENST00000557444 2447 ntBASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 AC141586.3-201ENST00000562166 1838 ntBASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 WRB-204ENST00000398753 699 ntTSL 3 BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 AL512356.2-201ENST00000546955 174 ntBASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 AL596325.1-201ENST00000563991 1082 ntBASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
COL17A1Q9UMD9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
COL17A1Q9UMD9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
COL17A1Q9UMD9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC26.92■■□□□ 1.9
COL17A1Q9UMD9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
COL17A1Q9UMD9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
COL17A1Q9UMD9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
COL17A1Q9UMD9 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
COL17A1Q9UMD9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC26.92■■□□□ 1.9
COL17A1Q9UMD9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC26.92■■□□□ 1.9
COL17A1Q9UMD9 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC26.92■■□□□ 1.9
COL17A1Q9UMD9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC26.92■■□□□ 1.9
COL17A1Q9UMD9 MED16-214ENST00000617672 554 ntTSL 5 BASIC26.92■■□□□ 1.9
COL17A1Q9UMD9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC26.92■■□□□ 1.9
COL17A1Q9UMD9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
COL17A1Q9UMD9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC26.92■■□□□ 1.9
COL17A1Q9UMD9 AL353593.2-201ENST00000602529 1483 ntBASIC26.91■■□□□ 1.9
COL17A1Q9UMD9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC26.91■■□□□ 1.9
COL17A1Q9UMD9 AL158211.5-201ENST00000623583 2518 ntBASIC26.91■■□□□ 1.9
COL17A1Q9UMD9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC26.91■■□□□ 1.9
COL17A1Q9UMD9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms