Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 AC092474.2-201ENST00000424288 719 ntBASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 AC103564.2-201ENST00000432853 1299 ntBASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 AC132938.5-201ENST00000624980 1813 ntBASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 NCF1C-201ENST00000438382 1427 ntBASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXXC1Q9P0U4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CXXC1Q9P0U4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CXXC1Q9P0U4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXXC1Q9P0U4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.14■□□□□ 0.65
CXXC1Q9P0U4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.14■□□□□ 0.65
CXXC1Q9P0U4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXXC1Q9P0U4 AC096734.2-201ENST00000562054 433 ntBASIC19.14■□□□□ 0.65
CXXC1Q9P0U4 AC138761.1-201ENST00000584393 385 ntBASIC19.14■□□□□ 0.65
CXXC1Q9P0U4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.14■□□□□ 0.65
CXXC1Q9P0U4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.14■□□□□ 0.65
CXXC1Q9P0U4 AC005498.2-205ENST00000593218 784 ntBASIC19.14■□□□□ 0.65
CXXC1Q9P0U4 AC010654.1-201ENST00000615722 808 ntBASIC19.14■□□□□ 0.65
CXXC1Q9P0U4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.14■□□□□ 0.65
CXXC1Q9P0U4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXXC1Q9P0U4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.14■□□□□ 0.65
CXXC1Q9P0U4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXXC1Q9P0U4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXXC1Q9P0U4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXXC1Q9P0U4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CXXC1Q9P0U4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 AL353593.2-201ENST00000602529 1483 ntBASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 AC025580.3-201ENST00000617932 1424 ntBASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 AC004461.1-201ENST00000412461 403 ntBASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 ACTG1P14-201ENST00000446382 1122 ntBASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 AC091812.2-201ENST00000619081 385 ntBASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 AL513210.1-201ENST00000629608 234 ntBASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms