Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 UNC93B2-201ENST00000285383 730 ntBASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE2Q9NRR3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 AC116562.4-202ENST00000641738 218 ntBASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE2Q9NRR3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC42SE2Q9NRR3 AC099398.1-201ENST00000567919 2776 ntBASIC12.35□□□□□ -0.43
CDC42SE2Q9NRR3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC12.35□□□□□ -0.43
CDC42SE2Q9NRR3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC42SE2Q9NRR3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.35□□□□□ -0.43
CDC42SE2Q9NRR3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms