Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CD248Q9HCU0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD248Q9HCU0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD248Q9HCU0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CD248Q9HCU0 BX276092.5-203ENST00000456199 560 ntBASIC18.86■□□□□ 0.61
CD248Q9HCU0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.86■□□□□ 0.61
CD248Q9HCU0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.86■□□□□ 0.61
CD248Q9HCU0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.86■□□□□ 0.61
CD248Q9HCU0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.86■□□□□ 0.61
CD248Q9HCU0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.86■□□□□ 0.61
CD248Q9HCU0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.86■□□□□ 0.61
CD248Q9HCU0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
CD248Q9HCU0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.86■□□□□ 0.61
CD248Q9HCU0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD248Q9HCU0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CD248Q9HCU0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CD248Q9HCU0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD248Q9HCU0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD248Q9HCU0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CD248Q9HCU0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CD248Q9HCU0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CD248Q9HCU0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD248Q9HCU0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD248Q9HCU0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD248Q9HCU0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.85■□□□□ 0.61
CD248Q9HCU0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CD248Q9HCU0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD248Q9HCU0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CD248Q9HCU0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD248Q9HCU0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD248Q9HCU0 KRT8P7-201ENST00000533003 1432 ntBASIC18.85■□□□□ 0.61
CD248Q9HCU0 AC126763.1-201ENST00000552015 2118 ntBASIC18.85■□□□□ 0.61
CD248Q9HCU0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.85■□□□□ 0.61
CD248Q9HCU0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD248Q9HCU0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD248Q9HCU0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.85■□□□□ 0.61
CD248Q9HCU0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD248Q9HCU0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CD248Q9HCU0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD248Q9HCU0 KRT8P26-201ENST00000534154 1276 ntBASIC18.85■□□□□ 0.61
CD248Q9HCU0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.85■□□□□ 0.61
CD248Q9HCU0 AC104390.1-201ENST00000555663 520 ntBASIC18.85■□□□□ 0.61
CD248Q9HCU0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.85■□□□□ 0.61
CD248Q9HCU0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.85■□□□□ 0.61
CD248Q9HCU0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.85■□□□□ 0.61
CD248Q9HCU0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD248Q9HCU0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD248Q9HCU0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.85■□□□□ 0.61
CD248Q9HCU0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CD248Q9HCU0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CD248Q9HCU0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD248Q9HCU0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD248Q9HCU0 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CD248Q9HCU0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CD248Q9HCU0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD248Q9HCU0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
CD248Q9HCU0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD248Q9HCU0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CD248Q9HCU0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD248Q9HCU0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CD248Q9HCU0 FP475955.4-201ENST00000623131 1990 ntBASIC18.84■□□□□ 0.61
CD248Q9HCU0 KRT8P32-201ENST00000512863 1461 ntBASIC18.84■□□□□ 0.61
CD248Q9HCU0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD248Q9HCU0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.84■□□□□ 0.61
CD248Q9HCU0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.84■□□□□ 0.61
CD248Q9HCU0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD248Q9HCU0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CD248Q9HCU0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.84■□□□□ 0.61
CD248Q9HCU0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD248Q9HCU0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD248Q9HCU0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CD248Q9HCU0 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD248Q9HCU0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD248Q9HCU0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD248Q9HCU0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.84■□□□□ 0.61
CD248Q9HCU0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
CD248Q9HCU0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.84■□□□□ 0.61
CD248Q9HCU0 RNF126P1-202ENST00000569893 925 ntBASIC18.84■□□□□ 0.61
CD248Q9HCU0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CD248Q9HCU0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD248Q9HCU0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.84■□□□□ 0.61
CD248Q9HCU0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD248Q9HCU0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.84■□□□□ 0.61
CD248Q9HCU0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD248Q9HCU0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CD248Q9HCU0 HTR7P1-202ENST00000624664 4411 ntBASIC18.84■□□□□ 0.61
CD248Q9HCU0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD248Q9HCU0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.84■□□□□ 0.61
CD248Q9HCU0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CD248Q9HCU0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CD248Q9HCU0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.83■□□□□ 0.61
CD248Q9HCU0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.83■□□□□ 0.61
CD248Q9HCU0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CD248Q9HCU0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
CD248Q9HCU0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CD248Q9HCU0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.83■□□□□ 0.61
CD248Q9HCU0 FEM1AP3-201ENST00000403722 1741 ntBASIC18.83■□□□□ 0.61
CD248Q9HCU0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CD248Q9HCU0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CD248Q9HCU0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms