Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.53■□□□□ 0.24
CHD8Q9HCK8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.53■□□□□ 0.24
CHD8Q9HCK8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CHD8Q9HCK8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CHD8Q9HCK8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD8Q9HCK8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.53■□□□□ 0.24
CHD8Q9HCK8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHD8Q9HCK8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.53■□□□□ 0.24
CHD8Q9HCK8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.53■□□□□ 0.24
CHD8Q9HCK8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.53■□□□□ 0.24
CHD8Q9HCK8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.53■□□□□ 0.24
CHD8Q9HCK8 MIR149-201ENST00000384879 89 ntBASIC16.53■□□□□ 0.24
CHD8Q9HCK8 AL512384.1-201ENST00000406683 331 ntBASIC16.53■□□□□ 0.24
CHD8Q9HCK8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.53■□□□□ 0.24
CHD8Q9HCK8 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.53■□□□□ 0.24
CHD8Q9HCK8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.53■□□□□ 0.24
CHD8Q9HCK8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.53■□□□□ 0.24
CHD8Q9HCK8 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.53■□□□□ 0.24
CHD8Q9HCK8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD8Q9HCK8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.53■□□□□ 0.24
CHD8Q9HCK8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD8Q9HCK8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD8Q9HCK8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.52■□□□□ 0.24
CHD8Q9HCK8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
CHD8Q9HCK8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHD8Q9HCK8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.52■□□□□ 0.24
CHD8Q9HCK8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.52■□□□□ 0.24
CHD8Q9HCK8 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHD8Q9HCK8 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.52■□□□□ 0.24
CHD8Q9HCK8 RAB43P1-201ENST00000561790 589 ntBASIC16.52■□□□□ 0.24
CHD8Q9HCK8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.52■□□□□ 0.24
CHD8Q9HCK8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.52■□□□□ 0.24
CHD8Q9HCK8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHD8Q9HCK8 AC020907.5-201ENST00000624372 1936 ntBASIC16.52■□□□□ 0.24
CHD8Q9HCK8 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.52■□□□□ 0.24
CHD8Q9HCK8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHD8Q9HCK8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHD8Q9HCK8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.52■□□□□ 0.24
CHD8Q9HCK8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CHD8Q9HCK8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHD8Q9HCK8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHD8Q9HCK8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.52■□□□□ 0.23
CHD8Q9HCK8 TREML5P-201ENST00000421694 576 ntBASIC16.52■□□□□ 0.23
CHD8Q9HCK8 AC096633.1-201ENST00000422446 749 ntBASIC16.52■□□□□ 0.23
CHD8Q9HCK8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.52■□□□□ 0.23
CHD8Q9HCK8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHD8Q9HCK8 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
CHD8Q9HCK8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.52■□□□□ 0.23
CHD8Q9HCK8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHD8Q9HCK8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.52■□□□□ 0.23
CHD8Q9HCK8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHD8Q9HCK8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
CHD8Q9HCK8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.52■□□□□ 0.23
CHD8Q9HCK8 AC138969.3-201ENST00000546612 1459 ntBASIC16.52■□□□□ 0.23
CHD8Q9HCK8 AC138932.2-201ENST00000548268 1459 ntBASIC16.52■□□□□ 0.23
CHD8Q9HCK8 AC126755.4-201ENST00000549796 1459 ntBASIC16.52■□□□□ 0.23
CHD8Q9HCK8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.52■□□□□ 0.23
CHD8Q9HCK8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 AC132938.2-201ENST00000579188 680 ntBASIC16.51■□□□□ 0.23
CHD8Q9HCK8 AL591163.1-201ENST00000641757 987 ntBASIC16.51■□□□□ 0.23
CHD8Q9HCK8 AC068587.9-201ENST00000641814 219 ntBASIC16.51■□□□□ 0.23
CHD8Q9HCK8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 HAUS4P1-201ENST00000406739 1145 ntBASIC16.51■□□□□ 0.23
CHD8Q9HCK8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CHD8Q9HCK8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.5■□□□□ 0.23
CHD8Q9HCK8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CHD8Q9HCK8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHD8Q9HCK8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHD8Q9HCK8 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.5■□□□□ 0.23
CHD8Q9HCK8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD8Q9HCK8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.5■□□□□ 0.23
CHD8Q9HCK8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.5■□□□□ 0.23
CHD8Q9HCK8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD8Q9HCK8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CHD8Q9HCK8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHD8Q9HCK8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD8Q9HCK8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.5■□□□□ 0.23
CHD8Q9HCK8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHD8Q9HCK8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD8Q9HCK8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD8Q9HCK8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CHD8Q9HCK8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CHD8Q9HCK8 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms