Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 SPDYE15P-201ENST00000424157 909 ntBASIC18.54■□□□□ 0.56
PCDH9Q9HC56 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH9Q9HC56 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 AC100803.2-201ENST00000562459 1963 ntBASIC18.53■□□□□ 0.56
PCDH9Q9HC56 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 AL359075.1-203ENST00000462729 1002 ntBASIC18.53■□□□□ 0.56
PCDH9Q9HC56 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 AC008687.5-201ENST00000593746 558 ntBASIC18.53■□□□□ 0.56
PCDH9Q9HC56 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH9Q9HC56 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 AC108860.2-201ENST00000562760 2183 ntBASIC18.52■□□□□ 0.56
PCDH9Q9HC56 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 KRT18P38-201ENST00000449496 1282 ntBASIC18.52■□□□□ 0.56
PCDH9Q9HC56 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 AC022616.7-201ENST00000525383 220 ntBASIC18.52■□□□□ 0.56
PCDH9Q9HC56 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH9Q9HC56 AL355312.1-201ENST00000407115 2176 ntBASIC18.52■□□□□ 0.56
PCDH9Q9HC56 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.52■□□□□ 0.55
PCDH9Q9HC56 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH9Q9HC56 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH9Q9HC56 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH9Q9HC56 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
PCDH9Q9HC56 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH9Q9HC56 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH9Q9HC56 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PCDH9Q9HC56 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH9Q9HC56 AC141586.5-201ENST00000624546 2050 ntBASIC18.51■□□□□ 0.55
PCDH9Q9HC56 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDH9Q9HC56 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH9Q9HC56 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDH9Q9HC56 FAM8A6P-201ENST00000407496 1135 ntBASIC18.51■□□□□ 0.55
PCDH9Q9HC56 PVRIG2P-201ENST00000435460 978 ntBASIC18.51■□□□□ 0.55
PCDH9Q9HC56 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH9Q9HC56 AL049597.2-201ENST00000565575 961 ntBASIC18.51■□□□□ 0.55
PCDH9Q9HC56 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms