Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 AL096828.2-201ENST00000567259 1965 ntBASIC15.7■□□□□ 0.1
CDH20Q9HBT6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 TSPY12P-201ENST00000421279 868 ntBASIC15.7■□□□□ 0.1
CDH20Q9HBT6 TSPY22P-201ENST00000427496 604 ntBASIC15.7■□□□□ 0.1
CDH20Q9HBT6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 AC011498.5-201ENST00000592027 486 ntBASIC15.7■□□□□ 0.1
CDH20Q9HBT6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 NOC2LP1-202ENST00000452600 2235 ntBASIC15.7■□□□□ 0.1
CDH20Q9HBT6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 AC093010.1-201ENST00000473625 1624 ntBASIC15.69■□□□□ 0.1
CDH20Q9HBT6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 ABALON-201ENST00000629058 1903 ntBASIC15.69■□□□□ 0.1
CDH20Q9HBT6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 BX276092.5-203ENST00000456199 560 ntBASIC15.69■□□□□ 0.1
CDH20Q9HBT6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 RNF126P1-202ENST00000569893 925 ntBASIC15.69■□□□□ 0.1
CDH20Q9HBT6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 AL390719.2-201ENST00000606993 987 ntBASIC15.69■□□□□ 0.1
CDH20Q9HBT6 AL358472.4-201ENST00000633140 710 ntBASIC15.69■□□□□ 0.1
CDH20Q9HBT6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH20Q9HBT6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 AL121672.3-201ENST00000608644 468 ntBASIC15.68■□□□□ 0.1
CDH20Q9HBT6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 AC116407.4-201ENST00000623319 1061 ntBASIC15.68■□□□□ 0.1
CDH20Q9HBT6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH20Q9HBT6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms