Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 AF186996.4-201ENST00000467186 377 ntBASIC18.82■□□□□ 0.6
ATXN3LQ9H3M9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.82■□□□□ 0.6
ATXN3LQ9H3M9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
ATXN3LQ9H3M9 AL138831.2-201ENST00000606564 490 ntBASIC18.82■□□□□ 0.6
ATXN3LQ9H3M9 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ATXN3LQ9H3M9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.82■□□□□ 0.6
ATXN3LQ9H3M9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
ATXN3LQ9H3M9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.82■□□□□ 0.6
ATXN3LQ9H3M9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATXN3LQ9H3M9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.82■□□□□ 0.6
ATXN3LQ9H3M9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.82■□□□□ 0.6
ATXN3LQ9H3M9 AC125634.1-201ENST00000438758 1403 ntBASIC18.82■□□□□ 0.6
ATXN3LQ9H3M9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATXN3LQ9H3M9 AC090164.3-201ENST00000610780 2143 ntBASIC18.82■□□□□ 0.6
ATXN3LQ9H3M9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATXN3LQ9H3M9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 KRT18P67-201ENST00000432816 1264 ntBASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3LQ9H3M9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 MTDHP3-201ENST00000594186 672 ntBASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 BX640515.1-201ENST00000617215 977 ntBASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 INTS4P1-201ENST00000438455 1935 ntBASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3LQ9H3M9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 AL031284.1-201ENST00000419297 478 ntBASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 AC112698.1-201ENST00000510299 916 ntBASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 AL355877.3-201ENST00000622820 899 ntBASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 AC148477.8-201ENST00000624298 468 ntBASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 1005.2 ms