Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 AL096828.2-201ENST00000567259 1965 ntBASIC16.64■□□□□ 0.25
UBQLN3Q9H347 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 GMCL1P1-201ENST00000463439 1581 ntBASIC16.64■□□□□ 0.25
UBQLN3Q9H347 FZD10-202ENST00000539839 3282 ntBASIC16.64■□□□□ 0.25
UBQLN3Q9H347 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN3Q9H347 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 KRT18P48-201ENST00000434763 852 ntBASIC16.63■□□□□ 0.25
UBQLN3Q9H347 KRT8P26-201ENST00000534154 1276 ntBASIC16.63■□□□□ 0.25
UBQLN3Q9H347 AL121672.3-201ENST00000608644 468 ntBASIC16.63■□□□□ 0.25
UBQLN3Q9H347 NPAP1P7-201ENST00000613027 823 ntBASIC16.63■□□□□ 0.25
UBQLN3Q9H347 AC093458.2-201ENST00000623150 629 ntBASIC16.63■□□□□ 0.25
UBQLN3Q9H347 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 AC016734.2-201ENST00000624325 1377 ntBASIC16.63■□□□□ 0.25
UBQLN3Q9H347 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN3Q9H347 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 BX276092.5-203ENST00000456199 560 ntBASIC16.62■□□□□ 0.25
UBQLN3Q9H347 AP003733.1-201ENST00000491725 852 ntBASIC16.62■□□□□ 0.25
UBQLN3Q9H347 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN3Q9H347 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 PHGDH-209ENST00000641074 1780 ntBASIC16.61■□□□□ 0.25
UBQLN3Q9H347 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms