Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 VN2R19P-201ENST00000442399 1052 ntBASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 AC015911.4-201ENST00000588022 1070 ntBASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 AC025048.6-201ENST00000634326 1161 ntBASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 AC105339.1-204ENST00000636249 355 ntBASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3Q9BZ76 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 AC099778.1-201ENST00000568593 1911 ntBASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 AL109659.2-201ENST00000606809 1674 ntBASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 COX5BP8-201ENST00000416911 349 ntBASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 HCG4B-203ENST00000450128 991 ntBASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 AL589182.2-201ENST00000619332 1049 ntBASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTNAP3Q9BZ76 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP3Q9BZ76 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP3Q9BZ76 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
CNTNAP3Q9BZ76 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP3Q9BZ76 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
CNTNAP3Q9BZ76 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 BX005266.1-201ENST00000473402 457 ntBASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 AL138831.2-201ENST00000606564 490 ntBASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms