Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL25A1Q9BXS0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.97■□□□□ 0.47
COL25A1Q9BXS0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
COL25A1Q9BXS0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.97■□□□□ 0.47
COL25A1Q9BXS0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
COL25A1Q9BXS0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL25A1Q9BXS0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL25A1Q9BXS0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.97■□□□□ 0.47
COL25A1Q9BXS0 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.97■□□□□ 0.47
COL25A1Q9BXS0 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL25A1Q9BXS0 SNX29P1-201ENST00000548357 1007 ntBASIC17.97■□□□□ 0.47
COL25A1Q9BXS0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.97■□□□□ 0.47
COL25A1Q9BXS0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL25A1Q9BXS0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.97■□□□□ 0.47
COL25A1Q9BXS0 UXT-AS1-201ENST00000590504 1525 ntBASIC17.97■□□□□ 0.47
COL25A1Q9BXS0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.97■□□□□ 0.47
COL25A1Q9BXS0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL25A1Q9BXS0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL25A1Q9BXS0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.97■□□□□ 0.47
COL25A1Q9BXS0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 AC234783.1-201ENST00000441761 496 ntBASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 FAM185BP-201ENST00000443595 716 ntBASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 IGHV3-62-201ENST00000520057 340 ntBASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL25A1Q9BXS0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.96■□□□□ 0.46
COL25A1Q9BXS0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 AC006538.1-201ENST00000567905 1585 ntBASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.95■□□□□ 0.46
COL25A1Q9BXS0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
COL25A1Q9BXS0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL25A1Q9BXS0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL25A1Q9BXS0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL25A1Q9BXS0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL25A1Q9BXS0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL25A1Q9BXS0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.94■□□□□ 0.46
COL25A1Q9BXS0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.94■□□□□ 0.46
COL25A1Q9BXS0 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
COL25A1Q9BXS0 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.94■□□□□ 0.46
COL25A1Q9BXS0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
COL25A1Q9BXS0 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.94■□□□□ 0.46
COL25A1Q9BXS0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
COL25A1Q9BXS0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.94■□□□□ 0.46
COL25A1Q9BXS0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms