Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 AC009113.1-201ENST00000570267 2443 ntBASIC10.72□□□□□ -0.69
LIMD2Q9BT23 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 KRT18P41-201ENST00000518924 1277 ntBASIC10.72□□□□□ -0.69
LIMD2Q9BT23 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 BX088651.1-201ENST00000540551 451 ntBASIC10.72□□□□□ -0.69
LIMD2Q9BT23 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 AL357033.4-201ENST00000617703 1807 ntBASIC10.72□□□□□ -0.69
LIMD2Q9BT23 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 ELP6-205ENST00000439305 880 ntTSL 2 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 PHB2-202ENST00000440277 996 ntTSL 5 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 AC008040.2-201ENST00000461049 708 ntBASIC10.71□□□□□ -0.69
LIMD2Q9BT23 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC10.71□□□□□ -0.69
LIMD2Q9BT23 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
LIMD2Q9BT23 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
LIMD2Q9BT23 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC10.71□□□□□ -0.7
LIMD2Q9BT23 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LIMD2Q9BT23 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LIMD2Q9BT23 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
LIMD2Q9BT23 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
LIMD2Q9BT23 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
LIMD2Q9BT23 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
LIMD2Q9BT23 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC10.71□□□□□ -0.7
LIMD2Q9BT23 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LIMD2Q9BT23 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LIMD2Q9BT23 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LIMD2Q9BT23 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
LIMD2Q9BT23 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC10.7□□□□□ -0.7
LIMD2Q9BT23 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
LIMD2Q9BT23 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC10.7□□□□□ -0.7
LIMD2Q9BT23 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LIMD2Q9BT23 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
LIMD2Q9BT23 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms