Protein–RNA interactions for Protein: Q9BR84

ZNF559, Zinc finger protein 559, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559Q9BR84 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
ZNF559Q9BR84 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF559Q9BR84 AC008687.5-201ENST00000593746 558 ntBASIC16.66■□□□□ 0.26
ZNF559Q9BR84 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.66■□□□□ 0.26
ZNF559Q9BR84 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF559Q9BR84 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF559Q9BR84 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF559Q9BR84 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF559Q9BR84 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF559Q9BR84 AC134043.2-201ENST00000624206 2238 ntBASIC16.66■□□□□ 0.26
ZNF559Q9BR84 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF559Q9BR84 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF559Q9BR84 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF559Q9BR84 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF559Q9BR84 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ZNF559Q9BR84 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.65■□□□□ 0.26
ZNF559Q9BR84 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 LINC01311-201ENST00000565162 1445 ntBASIC16.65■□□□□ 0.26
ZNF559Q9BR84 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF559Q9BR84 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ZNF559Q9BR84 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ZNF559Q9BR84 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
ZNF559Q9BR84 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 STARP1-201ENST00000397973 869 ntBASIC16.64■□□□□ 0.25
ZNF559Q9BR84 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 AC012313.10-201ENST00000623509 926 ntBASIC16.64■□□□□ 0.25
ZNF559Q9BR84 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ZNF559Q9BR84 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF559Q9BR84 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF559Q9BR84 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF559Q9BR84 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ZNF559Q9BR84 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF559Q9BR84 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF559Q9BR84 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF559Q9BR84 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF559Q9BR84 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF559Q9BR84 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ZNF559Q9BR84 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF559Q9BR84 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF559Q9BR84 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF559Q9BR84 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms