Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL12A1Q99715 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL12A1Q99715 AC010460.3-201ENST00000511359 1579 ntBASIC15.56■□□□□ 0.08
COL12A1Q99715 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL12A1Q99715 TUBB3P1-201ENST00000405796 1332 ntBASIC15.56■□□□□ 0.08
COL12A1Q99715 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
COL12A1Q99715 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL12A1Q99715 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
COL12A1Q99715 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL12A1Q99715 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.56■□□□□ 0.08
COL12A1Q99715 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL12A1Q99715 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL12A1Q99715 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL12A1Q99715 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL12A1Q99715 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.56■□□□□ 0.08
COL12A1Q99715 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
COL12A1Q99715 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
COL12A1Q99715 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.56■□□□□ 0.08
COL12A1Q99715 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL12A1Q99715 AC092919.2-201ENST00000623631 1645 ntBASIC15.56■□□□□ 0.08
COL12A1Q99715 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL12A1Q99715 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.56■□□□□ 0.08
COL12A1Q99715 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
COL12A1Q99715 COX5BP8-201ENST00000416911 349 ntBASIC15.56■□□□□ 0.08
COL12A1Q99715 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.56■□□□□ 0.08
COL12A1Q99715 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.56■□□□□ 0.08
COL12A1Q99715 AL512356.2-201ENST00000546955 174 ntBASIC15.56■□□□□ 0.08
COL12A1Q99715 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.56■□□□□ 0.08
COL12A1Q99715 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL12A1Q99715 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL12A1Q99715 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL12A1Q99715 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
COL12A1Q99715 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL12A1Q99715 SPDYE21P-201ENST00000413323 827 ntBASIC15.55■□□□□ 0.08
COL12A1Q99715 CNN2P2-201ENST00000443536 909 ntBASIC15.55■□□□□ 0.08
COL12A1Q99715 CNN2P3-201ENST00000450201 906 ntBASIC15.55■□□□□ 0.08
COL12A1Q99715 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.55■□□□□ 0.08
COL12A1Q99715 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.55■□□□□ 0.08
COL12A1Q99715 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.55■□□□□ 0.08
COL12A1Q99715 AC008687.5-201ENST00000593746 558 ntBASIC15.55■□□□□ 0.08
COL12A1Q99715 AL136317.3-201ENST00000618497 906 ntBASIC15.55■□□□□ 0.08
COL12A1Q99715 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL12A1Q99715 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
COL12A1Q99715 CU639417.3-201ENST00000624240 1404 ntBASIC15.55■□□□□ 0.08
COL12A1Q99715 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.55■□□□□ 0.08
COL12A1Q99715 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
COL12A1Q99715 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
COL12A1Q99715 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.55■□□□□ 0.08
COL12A1Q99715 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.55■□□□□ 0.08
COL12A1Q99715 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.55■□□□□ 0.08
COL12A1Q99715 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.55■□□□□ 0.08
COL12A1Q99715 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.55■□□□□ 0.08
COL12A1Q99715 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.55■□□□□ 0.08
COL12A1Q99715 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.55■□□□□ 0.08
COL12A1Q99715 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL12A1Q99715 AL662799.1-202ENST00000614205 422 ntBASIC15.55■□□□□ 0.08
COL12A1Q99715 AC004706.3-202ENST00000621574 984 ntBASIC15.55■□□□□ 0.08
COL12A1Q99715 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL12A1Q99715 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
COL12A1Q99715 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL12A1Q99715 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
COL12A1Q99715 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL12A1Q99715 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.55■□□□□ 0.08
COL12A1Q99715 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL12A1Q99715 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.54■□□□□ 0.08
COL12A1Q99715 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.54■□□□□ 0.08
COL12A1Q99715 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.54■□□□□ 0.08
COL12A1Q99715 IGHV3-71-201ENST00000523324 359 ntBASIC15.54■□□□□ 0.08
COL12A1Q99715 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL12A1Q99715 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.54■□□□□ 0.08
COL12A1Q99715 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL12A1Q99715 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL12A1Q99715 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL12A1Q99715 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
COL12A1Q99715 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL12A1Q99715 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
COL12A1Q99715 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.54■□□□□ 0.08
COL12A1Q99715 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.54■□□□□ 0.08
COL12A1Q99715 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL12A1Q99715 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
COL12A1Q99715 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.54■□□□□ 0.08
COL12A1Q99715 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
COL12A1Q99715 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.54■□□□□ 0.08
COL12A1Q99715 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.54■□□□□ 0.08
COL12A1Q99715 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL12A1Q99715 AC004790.2-201ENST00000623588 572 ntBASIC15.54■□□□□ 0.08
COL12A1Q99715 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL12A1Q99715 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
COL12A1Q99715 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL12A1Q99715 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL12A1Q99715 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL12A1Q99715 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
COL12A1Q99715 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.54■□□□□ 0.08
COL12A1Q99715 MIR4525-201ENST00000580000 75 ntBASIC15.54■□□□□ 0.08
COL12A1Q99715 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
COL12A1Q99715 AC009093.7-201ENST00000623853 1223 ntBASIC15.54■□□□□ 0.08
COL12A1Q99715 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
COL12A1Q99715 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.53■□□□□ 0.08
COL12A1Q99715 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.53■□□□□ 0.08
COL12A1Q99715 AC003669.1-201ENST00000334569 611 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms