Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RAB40CQ96S21 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RAB40CQ96S21 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.57□□□□□ -0.08
RAB40CQ96S21 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RAB40CQ96S21 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAB40CQ96S21 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40CQ96S21 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40CQ96S21 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40CQ96S21 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40CQ96S21 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB40CQ96S21 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40CQ96S21 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40CQ96S21 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40CQ96S21 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB40CQ96S21 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAB40CQ96S21 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40CQ96S21 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40CQ96S21 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB40CQ96S21 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB40CQ96S21 AC009065.1-201ENST00000564055 1225 ntBASIC14.56□□□□□ -0.08
RAB40CQ96S21 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40CQ96S21 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RAB40CQ96S21 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB40CQ96S21 AL031985.4-201ENST00000642138 673 ntBASIC14.56□□□□□ -0.08
RAB40CQ96S21 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40CQ96S21 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RAB40CQ96S21 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40CQ96S21 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40CQ96S21 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAB40CQ96S21 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40CQ96S21 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB40CQ96S21 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40CQ96S21 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40CQ96S21 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40CQ96S21 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40CQ96S21 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB40CQ96S21 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40CQ96S21 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40CQ96S21 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40CQ96S21 GPAT2P1-201ENST00000444924 1672 ntBASIC14.55□□□□□ -0.08
RAB40CQ96S21 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40CQ96S21 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40CQ96S21 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40CQ96S21 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40CQ96S21 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40CQ96S21 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40CQ96S21 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40CQ96S21 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40CQ96S21 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 MIR4651-201ENST00000582622 73 ntBASIC14.55□□□□□ -0.08
RAB40CQ96S21 AC006058.3-201ENST00000606217 1069 ntBASIC14.55□□□□□ -0.08
RAB40CQ96S21 AC130371.2-201ENST00000619443 611 ntBASIC14.55□□□□□ -0.08
RAB40CQ96S21 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 AL023875.1-201ENST00000640777 796 ntBASIC14.55□□□□□ -0.08
RAB40CQ96S21 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 KRT16P1-201ENST00000399124 1418 ntBASIC14.55□□□□□ -0.08
RAB40CQ96S21 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40CQ96S21 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40CQ96S21 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40CQ96S21 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40CQ96S21 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40CQ96S21 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40CQ96S21 NFIC-211ENST00000641145 8399 ntBASIC14.55□□□□□ -0.08
RAB40CQ96S21 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40CQ96S21 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RAB40CQ96S21 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RAB40CQ96S21 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RAB40CQ96S21 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.54□□□□□ -0.08
RAB40CQ96S21 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RAB40CQ96S21 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
RAB40CQ96S21 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 FAM201B-201ENST00000458407 597 ntBASIC14.54□□□□□ -0.08
RAB40CQ96S21 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB40CQ96S21 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms