Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC29.45■■■□□ 2.31
IFT140Q96RY7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC29.45■■■□□ 2.31
IFT140Q96RY7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC29.45■■■□□ 2.31
IFT140Q96RY7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
IFT140Q96RY7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC29.45■■■□□ 2.31
IFT140Q96RY7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
IFT140Q96RY7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
IFT140Q96RY7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC29.45■■■□□ 2.3
IFT140Q96RY7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC29.45■■■□□ 2.3
IFT140Q96RY7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
IFT140Q96RY7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
IFT140Q96RY7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC29.44■■■□□ 2.3
IFT140Q96RY7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC29.44■■■□□ 2.3
IFT140Q96RY7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
IFT140Q96RY7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC29.44■■■□□ 2.3
IFT140Q96RY7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
IFT140Q96RY7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
IFT140Q96RY7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
IFT140Q96RY7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
IFT140Q96RY7 WRB-204ENST00000398753 699 ntTSL 3 BASIC29.44■■■□□ 2.3
IFT140Q96RY7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC29.44■■■□□ 2.3
IFT140Q96RY7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC29.44■■■□□ 2.3
IFT140Q96RY7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC29.44■■■□□ 2.3
IFT140Q96RY7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC29.44■■■□□ 2.3
IFT140Q96RY7 LINC02560-201ENST00000596379 459 ntBASIC29.44■■■□□ 2.3
IFT140Q96RY7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC29.44■■■□□ 2.3
IFT140Q96RY7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC29.44■■■□□ 2.3
IFT140Q96RY7 ACTL9-202ENST00000612068 1252 ntBASIC29.44■■■□□ 2.3
IFT140Q96RY7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
IFT140Q96RY7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC29.44■■■□□ 2.3
IFT140Q96RY7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC29.43■■■□□ 2.3
IFT140Q96RY7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC29.43■■■□□ 2.3
IFT140Q96RY7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC29.43■■■□□ 2.3
IFT140Q96RY7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC29.43■■■□□ 2.3
IFT140Q96RY7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
IFT140Q96RY7 AC069335.1-201ENST00000489972 472 ntBASIC29.43■■■□□ 2.3
IFT140Q96RY7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC29.43■■■□□ 2.3
IFT140Q96RY7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC29.43■■■□□ 2.3
IFT140Q96RY7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC29.43■■■□□ 2.3
IFT140Q96RY7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
IFT140Q96RY7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC29.43■■■□□ 2.3
IFT140Q96RY7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
IFT140Q96RY7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
IFT140Q96RY7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC29.43■■■□□ 2.3
IFT140Q96RY7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
IFT140Q96RY7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
IFT140Q96RY7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
IFT140Q96RY7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
IFT140Q96RY7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC29.43■■■□□ 2.3
IFT140Q96RY7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
IFT140Q96RY7 AL161938.1-201ENST00000569833 2180 ntBASIC29.43■■■□□ 2.3
IFT140Q96RY7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
IFT140Q96RY7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC29.43■■■□□ 2.3
IFT140Q96RY7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
IFT140Q96RY7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
IFT140Q96RY7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
IFT140Q96RY7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
IFT140Q96RY7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
IFT140Q96RY7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC29.42■■■□□ 2.3
IFT140Q96RY7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC29.42■■■□□ 2.3
IFT140Q96RY7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC29.42■■■□□ 2.3
IFT140Q96RY7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC29.42■■■□□ 2.3
IFT140Q96RY7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC29.42■■■□□ 2.3
IFT140Q96RY7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC29.42■■■□□ 2.3
IFT140Q96RY7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
IFT140Q96RY7 AL032819.2-201ENST00000624543 2162 ntBASIC29.42■■■□□ 2.3
IFT140Q96RY7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
IFT140Q96RY7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC29.42■■■□□ 2.3
IFT140Q96RY7 MIR943-201ENST00000401286 94 ntBASIC29.42■■■□□ 2.3
IFT140Q96RY7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC29.42■■■□□ 2.3
IFT140Q96RY7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
IFT140Q96RY7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC29.42■■■□□ 2.3
IFT140Q96RY7 STK25P1-201ENST00000585406 838 ntBASIC29.42■■■□□ 2.3
IFT140Q96RY7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
IFT140Q96RY7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC29.42■■■□□ 2.3
IFT140Q96RY7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC29.42■■■□□ 2.3
IFT140Q96RY7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
IFT140Q96RY7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
IFT140Q96RY7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC29.41■■■□□ 2.3
IFT140Q96RY7 AC018445.3-201ENST00000624177 1945 ntBASIC29.41■■■□□ 2.3
IFT140Q96RY7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC29.41■■■□□ 2.3
IFT140Q96RY7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC29.41■■■□□ 2.3
IFT140Q96RY7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC29.41■■■□□ 2.3
IFT140Q96RY7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
IFT140Q96RY7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
IFT140Q96RY7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
IFT140Q96RY7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
IFT140Q96RY7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
IFT140Q96RY7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
IFT140Q96RY7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
IFT140Q96RY7 KRT18P32-201ENST00000424695 1287 ntBASIC29.41■■■□□ 2.3
IFT140Q96RY7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC29.41■■■□□ 2.3
IFT140Q96RY7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC29.41■■■□□ 2.3
IFT140Q96RY7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
IFT140Q96RY7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
IFT140Q96RY7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
IFT140Q96RY7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC29.4■■■□□ 2.3
IFT140Q96RY7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
IFT140Q96RY7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
IFT140Q96RY7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms