Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DUX3Q96PT4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
DUX3Q96PT4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC13.96□□□□□ -0.17
DUX3Q96PT4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.96□□□□□ -0.17
DUX3Q96PT4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
DUX3Q96PT4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DUX3Q96PT4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DUX3Q96PT4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
DUX3Q96PT4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
DUX3Q96PT4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DUX3Q96PT4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DUX3Q96PT4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DUX3Q96PT4 AC004870.1-201ENST00000315132 882 ntBASIC13.96□□□□□ -0.17
DUX3Q96PT4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.96□□□□□ -0.17
DUX3Q96PT4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
DUX3Q96PT4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
DUX3Q96PT4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
DUX3Q96PT4 TSPY19P-201ENST00000418461 509 ntBASIC13.96□□□□□ -0.17
DUX3Q96PT4 TSPY18P-201ENST00000441642 509 ntBASIC13.96□□□□□ -0.17
DUX3Q96PT4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.96□□□□□ -0.17
DUX3Q96PT4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.96□□□□□ -0.17
DUX3Q96PT4 KRT18P31-201ENST00000506277 1292 ntBASIC13.96□□□□□ -0.17
DUX3Q96PT4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DUX3Q96PT4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.96□□□□□ -0.17
DUX3Q96PT4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.96□□□□□ -0.17
DUX3Q96PT4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.96□□□□□ -0.17
DUX3Q96PT4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.96□□□□□ -0.17
DUX3Q96PT4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.96□□□□□ -0.17
DUX3Q96PT4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DUX3Q96PT4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DUX3Q96PT4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DUX3Q96PT4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.96□□□□□ -0.17
DUX3Q96PT4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DUX3Q96PT4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DUX3Q96PT4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DUX3Q96PT4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.96□□□□□ -0.18
DUX3Q96PT4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.96□□□□□ -0.18
DUX3Q96PT4 AL031598.1-201ENST00000561511 1773 ntBASIC13.96□□□□□ -0.18
DUX3Q96PT4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
DUX3Q96PT4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
DUX3Q96PT4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
DUX3Q96PT4 CROCCP3-202ENST00000420820 1947 ntBASIC13.96□□□□□ -0.18
DUX3Q96PT4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DUX3Q96PT4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.95□□□□□ -0.18
DUX3Q96PT4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX3Q96PT4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX3Q96PT4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX3Q96PT4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms