Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
NSMCE2Q96MF7 HOXB1-202ENST00000577092 1414 ntBASIC16.96■□□□□ 0.3
NSMCE2Q96MF7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NSMCE2Q96MF7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 AC096733.2-201ENST00000609937 1394 ntBASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 DUTP2-201ENST00000519164 463 ntBASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 AC009065.1-201ENST00000564055 1225 ntBASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NSMCE2Q96MF7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 KRT18P23-201ENST00000435622 1283 ntBASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 AL118508.1-201ENST00000613502 2345 ntBASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 KRT8P7-201ENST00000533003 1432 ntBASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.94■□□□□ 0.3
NSMCE2Q96MF7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 AL355802.2-201ENST00000402069 882 ntBASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 AF186192.3-201ENST00000583427 947 ntBASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 AL024508.2-201ENST00000607749 1894 ntBASIC16.93■□□□□ 0.3
NSMCE2Q96MF7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 AC100803.2-201ENST00000562459 1963 ntBASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms