Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS1Q92902 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HPS1Q92902 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HPS1Q92902 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.45■□□□□ 0.22
HPS1Q92902 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.45■□□□□ 0.22
HPS1Q92902 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.45■□□□□ 0.22
HPS1Q92902 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS1Q92902 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HPS1Q92902 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS1Q92902 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HPS1Q92902 KRT16P1-201ENST00000399124 1418 ntBASIC16.45■□□□□ 0.22
HPS1Q92902 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HPS1Q92902 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS1Q92902 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HPS1Q92902 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
HPS1Q92902 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.44■□□□□ 0.22
HPS1Q92902 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.44■□□□□ 0.22
HPS1Q92902 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPS1Q92902 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPS1Q92902 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HPS1Q92902 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HPS1Q92902 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPS1Q92902 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPS1Q92902 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.44■□□□□ 0.22
HPS1Q92902 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPS1Q92902 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPS1Q92902 AC116562.2-201ENST00000507042 360 ntBASIC16.44■□□□□ 0.22
HPS1Q92902 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HPS1Q92902 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPS1Q92902 AC145285.6-201ENST00000604632 637 ntBASIC16.44■□□□□ 0.22
HPS1Q92902 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.44■□□□□ 0.22
HPS1Q92902 REXO1L10P-201ENST00000615707 1290 ntBASIC16.44■□□□□ 0.22
HPS1Q92902 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPS1Q92902 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.44■□□□□ 0.22
HPS1Q92902 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.44■□□□□ 0.22
HPS1Q92902 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPS1Q92902 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
HPS1Q92902 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
HPS1Q92902 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.44■□□□□ 0.22
HPS1Q92902 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HPS1Q92902 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPS1Q92902 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPS1Q92902 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.44■□□□□ 0.22
HPS1Q92902 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPS1Q92902 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.43■□□□□ 0.22
HPS1Q92902 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS1Q92902 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.43■□□□□ 0.22
HPS1Q92902 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.43■□□□□ 0.22
HPS1Q92902 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.43■□□□□ 0.22
HPS1Q92902 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.43■□□□□ 0.22
HPS1Q92902 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS1Q92902 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS1Q92902 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
HPS1Q92902 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS1Q92902 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS1Q92902 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS1Q92902 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.43■□□□□ 0.22
HPS1Q92902 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.43■□□□□ 0.22
HPS1Q92902 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HPS1Q92902 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS1Q92902 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS1Q92902 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HPS1Q92902 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS1Q92902 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
HPS1Q92902 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS1Q92902 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS1Q92902 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS1Q92902 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
HPS1Q92902 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HPS1Q92902 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.43■□□□□ 0.22
HPS1Q92902 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.43■□□□□ 0.22
HPS1Q92902 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS1Q92902 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.43■□□□□ 0.22
HPS1Q92902 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.43■□□□□ 0.22
HPS1Q92902 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.43■□□□□ 0.22
HPS1Q92902 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS1Q92902 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.43■□□□□ 0.22
HPS1Q92902 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HPS1Q92902 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HPS1Q92902 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS1Q92902 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS1Q92902 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.42■□□□□ 0.22
HPS1Q92902 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.42■□□□□ 0.22
HPS1Q92902 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HPS1Q92902 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
HPS1Q92902 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS1Q92902 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS1Q92902 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS1Q92902 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
HPS1Q92902 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HPS1Q92902 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HPS1Q92902 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HPS1Q92902 RCN1P1-201ENST00000400413 996 ntBASIC16.42■□□□□ 0.22
HPS1Q92902 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.42■□□□□ 0.22
HPS1Q92902 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.42■□□□□ 0.22
HPS1Q92902 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.42■□□□□ 0.22
HPS1Q92902 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS1Q92902 CR392000.1-201ENST00000624770 1228 ntBASIC16.42■□□□□ 0.22
HPS1Q92902 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC16.42■□□□□ 0.22
HPS1Q92902 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms