Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC4Q92889 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC4Q92889 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ERCC4Q92889 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC4Q92889 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC4Q92889 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC4Q92889 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ERCC4Q92889 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC4Q92889 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.35■□□□□ 0.85
ERCC4Q92889 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC4Q92889 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.35■□□□□ 0.85
ERCC4Q92889 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.35■□□□□ 0.85
ERCC4Q92889 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.35■□□□□ 0.85
ERCC4Q92889 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
ERCC4Q92889 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC4Q92889 CCR12P-201ENST00000446203 998 ntBASIC20.35■□□□□ 0.85
ERCC4Q92889 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC4Q92889 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.35■□□□□ 0.85
ERCC4Q92889 MIR4785-201ENST00000585005 73 ntBASIC20.35■□□□□ 0.85
ERCC4Q92889 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC4Q92889 AC010240.3-201ENST00000607688 395 ntBASIC20.35■□□□□ 0.85
ERCC4Q92889 AC024243.1-201ENST00000609234 778 ntBASIC20.35■□□□□ 0.85
ERCC4Q92889 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.35■□□□□ 0.85
ERCC4Q92889 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.35■□□□□ 0.85
ERCC4Q92889 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC4Q92889 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
ERCC4Q92889 KRT8P7-201ENST00000533003 1432 ntBASIC20.35■□□□□ 0.85
ERCC4Q92889 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC4Q92889 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.34■□□□□ 0.85
ERCC4Q92889 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC4Q92889 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC4Q92889 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC4Q92889 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC4Q92889 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ERCC4Q92889 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.34■□□□□ 0.85
ERCC4Q92889 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC4Q92889 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
ERCC4Q92889 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.34■□□□□ 0.85
ERCC4Q92889 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC4Q92889 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC4Q92889 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.34■□□□□ 0.85
ERCC4Q92889 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.34■□□□□ 0.85
ERCC4Q92889 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC4Q92889 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.34■□□□□ 0.85
ERCC4Q92889 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.34■□□□□ 0.85
ERCC4Q92889 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.34■□□□□ 0.85
ERCC4Q92889 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC4Q92889 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC4Q92889 AC116562.4-202ENST00000641738 218 ntBASIC20.34■□□□□ 0.85
ERCC4Q92889 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.34■□□□□ 0.85
ERCC4Q92889 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC4Q92889 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC4Q92889 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.34■□□□□ 0.85
ERCC4Q92889 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC4Q92889 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
ERCC4Q92889 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.34■□□□□ 0.85
ERCC4Q92889 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ERCC4Q92889 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
ERCC4Q92889 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.33■□□□□ 0.85
ERCC4Q92889 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.33■□□□□ 0.85
ERCC4Q92889 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ERCC4Q92889 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.33■□□□□ 0.85
ERCC4Q92889 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 SEC1P-202ENST00000473944 940 ntBASIC20.33■□□□□ 0.85
ERCC4Q92889 AC093827.2-201ENST00000512654 315 ntBASIC20.33■□□□□ 0.85
ERCC4Q92889 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.33■□□□□ 0.85
ERCC4Q92889 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.33■□□□□ 0.85
ERCC4Q92889 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.33■□□□□ 0.85
ERCC4Q92889 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.33■□□□□ 0.85
ERCC4Q92889 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.33■□□□□ 0.85
ERCC4Q92889 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.33■□□□□ 0.85
ERCC4Q92889 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC4Q92889 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.33■□□□□ 0.84
ERCC4Q92889 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ERCC4Q92889 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ERCC4Q92889 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ERCC4Q92889 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ERCC4Q92889 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.33■□□□□ 0.84
ERCC4Q92889 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.84
ERCC4Q92889 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.33■□□□□ 0.84
ERCC4Q92889 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC4Q92889 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms