Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.23■□□□□ 0.83
USP6NLQ92738 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.23■□□□□ 0.83
USP6NLQ92738 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.23■□□□□ 0.83
USP6NLQ92738 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.23■□□□□ 0.83
USP6NLQ92738 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.23■□□□□ 0.83
USP6NLQ92738 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP6NLQ92738 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.23■□□□□ 0.83
USP6NLQ92738 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.23■□□□□ 0.83
USP6NLQ92738 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.23■□□□□ 0.83
USP6NLQ92738 AL589182.2-201ENST00000619332 1049 ntBASIC20.23■□□□□ 0.83
USP6NLQ92738 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.23■□□□□ 0.83
USP6NLQ92738 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
USP6NLQ92738 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
USP6NLQ92738 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
USP6NLQ92738 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.23■□□□□ 0.83
USP6NLQ92738 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP6NLQ92738 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP6NLQ92738 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
USP6NLQ92738 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
USP6NLQ92738 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP6NLQ92738 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP6NLQ92738 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP6NLQ92738 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP6NLQ92738 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.22■□□□□ 0.83
USP6NLQ92738 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP6NLQ92738 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.22■□□□□ 0.83
USP6NLQ92738 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.22■□□□□ 0.83
USP6NLQ92738 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP6NLQ92738 BX323043.1-201ENST00000641006 1765 ntBASIC20.22■□□□□ 0.83
USP6NLQ92738 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.22■□□□□ 0.83
USP6NLQ92738 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.22■□□□□ 0.83
USP6NLQ92738 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.22■□□□□ 0.83
USP6NLQ92738 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.22■□□□□ 0.83
USP6NLQ92738 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
USP6NLQ92738 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.22■□□□□ 0.83
USP6NLQ92738 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP6NLQ92738 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP6NLQ92738 AC004706.3-202ENST00000621574 984 ntBASIC20.22■□□□□ 0.83
USP6NLQ92738 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.22■□□□□ 0.83
USP6NLQ92738 AC092865.6-201ENST00000642101 219 ntBASIC20.22■□□□□ 0.83
USP6NLQ92738 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP6NLQ92738 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.22■□□□□ 0.83
USP6NLQ92738 AC005082.1-201ENST00000413042 2259 ntBASIC20.22■□□□□ 0.83
USP6NLQ92738 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.22■□□□□ 0.83
USP6NLQ92738 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
USP6NLQ92738 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP6NLQ92738 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP6NLQ92738 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP6NLQ92738 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.21■□□□□ 0.83
USP6NLQ92738 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
USP6NLQ92738 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP6NLQ92738 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.21■□□□□ 0.83
USP6NLQ92738 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
USP6NLQ92738 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP6NLQ92738 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.21■□□□□ 0.83
USP6NLQ92738 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
USP6NLQ92738 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.21■□□□□ 0.83
USP6NLQ92738 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
USP6NLQ92738 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.21■□□□□ 0.83
USP6NLQ92738 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.21■□□□□ 0.83
USP6NLQ92738 AL596442.2-201ENST00000610240 980 ntBASIC20.21■□□□□ 0.83
USP6NLQ92738 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
USP6NLQ92738 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.21■□□□□ 0.83
USP6NLQ92738 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
USP6NLQ92738 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP6NLQ92738 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
USP6NLQ92738 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
USP6NLQ92738 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
USP6NLQ92738 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP6NLQ92738 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
USP6NLQ92738 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP6NLQ92738 AC002310.6-201ENST00000624451 1377 ntBASIC20.21■□□□□ 0.83
USP6NLQ92738 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP6NLQ92738 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
USP6NLQ92738 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP6NLQ92738 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
USP6NLQ92738 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP6NLQ92738 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP6NLQ92738 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP6NLQ92738 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP6NLQ92738 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.2■□□□□ 0.82
USP6NLQ92738 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP6NLQ92738 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP6NLQ92738 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP6NLQ92738 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.2■□□□□ 0.82
USP6NLQ92738 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP6NLQ92738 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP6NLQ92738 ALG1L5P-201ENST00000482043 771 ntBASIC20.2■□□□□ 0.82
USP6NLQ92738 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP6NLQ92738 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
USP6NLQ92738 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.2■□□□□ 0.82
USP6NLQ92738 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.2■□□□□ 0.82
USP6NLQ92738 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP6NLQ92738 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP6NLQ92738 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
USP6NLQ92738 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP6NLQ92738 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.2■□□□□ 0.82
USP6NLQ92738 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP6NLQ92738 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.2■□□□□ 0.82
USP6NLQ92738 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms