Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.11■□□□□ 0.65
DDX1Q92499 MIR3652-201ENST00000579335 131 ntBASIC19.11■□□□□ 0.65
DDX1Q92499 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.11■□□□□ 0.65
DDX1Q92499 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
DDX1Q92499 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.11■□□□□ 0.65
DDX1Q92499 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX1Q92499 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX1Q92499 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX1Q92499 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX1Q92499 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.11■□□□□ 0.65
DDX1Q92499 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX1Q92499 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DDX1Q92499 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX1Q92499 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX1Q92499 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
DDX1Q92499 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.1■□□□□ 0.65
DDX1Q92499 AC020763.4-201ENST00000623414 4170 ntBASIC19.1■□□□□ 0.65
DDX1Q92499 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.1■□□□□ 0.65
DDX1Q92499 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DDX1Q92499 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.1■□□□□ 0.65
DDX1Q92499 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.1■□□□□ 0.65
DDX1Q92499 AP003733.1-201ENST00000491725 852 ntBASIC19.1■□□□□ 0.65
DDX1Q92499 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.1■□□□□ 0.65
DDX1Q92499 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.1■□□□□ 0.65
DDX1Q92499 RNF126P1-202ENST00000569893 925 ntBASIC19.1■□□□□ 0.65
DDX1Q92499 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.1■□□□□ 0.65
DDX1Q92499 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX1Q92499 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX1Q92499 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX1Q92499 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX1Q92499 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.1■□□□□ 0.65
DDX1Q92499 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DDX1Q92499 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX1Q92499 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX1Q92499 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX1Q92499 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX1Q92499 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX1Q92499 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX1Q92499 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.09■□□□□ 0.65
DDX1Q92499 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX1Q92499 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
DDX1Q92499 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX1Q92499 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX1Q92499 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX1Q92499 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX1Q92499 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
DDX1Q92499 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
DDX1Q92499 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX1Q92499 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX1Q92499 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX1Q92499 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.09■□□□□ 0.65
DDX1Q92499 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.09■□□□□ 0.65
DDX1Q92499 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.09■□□□□ 0.65
DDX1Q92499 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.09■□□□□ 0.65
DDX1Q92499 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX1Q92499 ZNF444P1-201ENST00000559497 298 ntBASIC19.09■□□□□ 0.65
DDX1Q92499 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.09■□□□□ 0.65
DDX1Q92499 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
DDX1Q92499 AC009154.2-201ENST00000621177 724 ntBASIC19.09■□□□□ 0.65
DDX1Q92499 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX1Q92499 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX1Q92499 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX1Q92499 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX1Q92499 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX1Q92499 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX1Q92499 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
DDX1Q92499 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX1Q92499 AL353692.3-201ENST00000407031 1396 ntBASIC19.08■□□□□ 0.65
DDX1Q92499 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
DDX1Q92499 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
DDX1Q92499 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.08■□□□□ 0.65
DDX1Q92499 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.08■□□□□ 0.65
DDX1Q92499 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
DDX1Q92499 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX1Q92499 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
DDX1Q92499 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX1Q92499 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
DDX1Q92499 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX1Q92499 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
DDX1Q92499 GPR32P1-201ENST00000601788 811 ntBASIC19.08■□□□□ 0.64
DDX1Q92499 AL390719.2-201ENST00000606993 987 ntBASIC19.08■□□□□ 0.64
DDX1Q92499 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.08■□□□□ 0.64
DDX1Q92499 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX1Q92499 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX1Q92499 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
DDX1Q92499 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX1Q92499 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX1Q92499 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX1Q92499 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
DDX1Q92499 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.08■□□□□ 0.64
DDX1Q92499 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX1Q92499 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX1Q92499 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.07■□□□□ 0.64
DDX1Q92499 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX1Q92499 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX1Q92499 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX1Q92499 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX1Q92499 AC009949.1-201ENST00000623048 1830 ntBASIC19.07■□□□□ 0.64
DDX1Q92499 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX1Q92499 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms