Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 RN7SL818P-201ENST00000485099 259 ntBASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 AC079140.1-201ENST00000508039 487 ntBASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 RN7SL725P-201ENST00000606439 259 ntBASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 AL365330.1-201ENST00000607459 531 ntBASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 AC034236.2-201ENST00000606662 1610 ntBASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 CHCHD2P3-201ENST00000603038 451 ntBASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 AC007064.4-201ENST00000637740 555 ntBASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 PDIA3P1-201ENST00000471856 1510 ntBASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 AL662890.1-201ENST00000396818 632 ntBASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 MIR6756-201ENST00000616240 63 ntBASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 FAM86C2P-203ENST00000528684 1004 ntBASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 AL512353.2-201ENST00000448759 1962 ntBASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 STK25P1-201ENST00000585406 838 ntBASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 SNX15-201ENST00000352068 771 ntTSL 5 BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 CTBP2P5-201ENST00000454986 1264 ntBASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE2Q8WXH0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms