Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 COX5BP2-201ENST00000392354 334 ntBASIC13.9□□□□□ -0.18
LINC01006Q8NI28 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.9□□□□□ -0.18
LINC01006Q8NI28 AC004832.2-201ENST00000426397 482 ntBASIC13.9□□□□□ -0.18
LINC01006Q8NI28 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 AC136632.2-201ENST00000512891 861 ntBASIC13.9□□□□□ -0.18
LINC01006Q8NI28 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 AC002347.1-201ENST00000569543 541 ntBASIC13.9□□□□□ -0.18
LINC01006Q8NI28 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 AC073592.5-201ENST00000624854 528 ntBASIC13.9□□□□□ -0.18
LINC01006Q8NI28 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 AC079781.4-201ENST00000641908 219 ntBASIC13.9□□□□□ -0.18
LINC01006Q8NI28 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 AL031598.1-201ENST00000561511 1773 ntBASIC13.9□□□□□ -0.18
LINC01006Q8NI28 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LINC01006Q8NI28 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
LINC01006Q8NI28 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
LINC01006Q8NI28 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 AC073621.1-201ENST00000392730 636 ntBASIC13.89□□□□□ -0.19
LINC01006Q8NI28 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 RPS8P6-201ENST00000426177 609 ntBASIC13.89□□□□□ -0.19
LINC01006Q8NI28 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 DUTP2-201ENST00000519164 463 ntBASIC13.89□□□□□ -0.19
LINC01006Q8NI28 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01006Q8NI28 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 AC023274.1-201ENST00000418278 595 ntBASIC13.88□□□□□ -0.19
LINC01006Q8NI28 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 AC108751.1-201ENST00000490852 363 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms